Search Results - "Brown, Anne V"

Genome-wide associations and epistatic interactions for internode number, plant height, seed weight and seed yield in soybean by Assefa, Teshale, Otyama, Paul I, Brown, Anne V, Kalberer, Scott R, Kulkarni, Roshan S, Cannon, Steven B

“…Breeding programs benefit from information about marker-trait associations for many traits, whether the goal is to place those traits under active selection or…”
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Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing by Valliyodan, Babu, Brown, Anne V., Wang, Juexin, Patil, Gunvant, Liu, Yang, Otyama, Paul I., Nelson, Rex T., Vuong, Tri, Song, Qijian, Musket, Theresa A., Wagner, Ruth, Marri, Pradeep, Reddy, Sam, Sessions, Allen, Wu, Xiaolei, Grant, David, Bayer, Philipp E., Roorkiwal, Manish, Varshney, Rajeev K., Liu, Xin, Edwards, David, Xu, Dong, Joshi, Trupti, Cannon, Steven B., Nguyen, Henry T.

“…We report characteristics of soybean genetic diversity and structure from the resequencing of 481 diverse soybean accessions, comprising 52 wild ( Glycine soja…”
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Ten quick tips for sharing open genomic data by Brown, Anne V, Campbell, Jacqueline D, Assefa, Teshale, Grant, David, Nelson, Rex T, Weeks, Nathan T, Cannon, Steven B

“…As sequencing prices drop, genomic data accumulates-seemingly at a steadily increasing pace. Most genomic data potentially have value beyond the initial…”
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Using Crop Databases to Explore Phenotypes: From QTL to Candidate Genes by Brown, Anne V., Grant, David, Nelson, Rex T.

“…Seeds, especially those of certain grasses and legumes, provide the majority of the protein and carbohydrates for much of the world’s population. Therefore,…”
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The legume information system and associated online genomic resources by Berendzen, Joel, Brown, Anne V., Cameron, Connor T., Campbell, Jacqueline D., Cleary, Alan M., Dash, Sudhansu, Hokin, Samuel, Huang, Wei, Kalberer, Scott R., Nelson, Rex T., Redsun, Sven, Weeks, Nathan T., Wilkey, Andrew, Farmer, Andrew D., Cannon, Steven B.

“…The Legume Information System (LIS; https://legumeinfo.org) houses genetic and genomic data, integrated in various online tools to allow comparative genomic…”
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A new decade and new data at SoyBase, the USDA-ARS soybean genetics and genomics database by Brown, Anne V, Conners, Shawn I, Huang, Wei, Wilkey, Andrew P, Grant, David, Weeks, Nathan T, Cannon, Steven B, Graham, Michelle A, Nelson, Rex T

“…Abstract SoyBase, a USDA genetic and genomics database, holds professionally curated soybean genetic and genomic data, which is integrated and made accessible…”
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Construction and comparison of three reference‐quality genome assemblies for soybean by Valliyodan, Babu, Cannon, Steven B., Bayer, Philipp E., Shu, Shengqiang, Brown, Anne V., Ren, Longhui, Jenkins, Jerry, Chung, Claire Y.‐L., Chan, Ting‐Fung, Daum, Christopher G., Plott, Christopher, Hastie, Alex, Baruch, Kobi, Barry, Kerrie W., Huang, Wei, Patil, Gunvant, Varshney, Rajeev K., Hu, Haifei, Batley, Jacqueline, Yuan, Yuxuan, Song, Qijian, Stupar, Robert M., Goodstein, David M., Stacey, Gary, Lam, Hon‐Ming, Jackson, Scott A., Schmutz, Jeremy, Grimwood, Jane, Edwards, David, Nguyen, Henry T.

“…Summary We report reference‐quality genome assemblies and annotations for two accessions of soybean (Glycine max) and for one accession of Glycine soja, the…”
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A review of breeding objectives, genomic resources, and marker-assisted methods in common bean (Phaseolus vulgaris L.) by Assefa, Teshale, Assibi Mahama, A., Brown, Anne V., Cannon, Ethalinda K. S., Rubyogo, Jean Claude, Rao, Idupulapati M., Blair, Matthew W., Cannon, Steven B.

“…Common bean ( Phaseolus vulgaris L.), one of the most important grain legume crops for direct human consumption, faces many challenges as a crop. Domesticated…”
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Transcriptional profiling of mechanically and genetically sink‐limited soybeans by Brown, Anne V., Hudson, Karen A.

“…The absence of a reproductive sink causes physiological and morphological changes in soybean plants. These include increased accumulation of nitrogen and…”
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Developmental profiling of gene expression in soybean trifoliate leaves and cotyledons by Brown, Anne V, Hudson, Karen A

“…Immediately following germination, the developing soybean seedling relies on the nutrient reserves stored in the cotyledons to sustain heterotrophic growth…”
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GCViT: a method for interactive, genome-wide visualization of resequencing and SNP array data by Wilkey, Andrew P, Brown, Anne V, Cannon, Steven B, Cannon, Ethalinda K S

“…Large genotyping datasets have become commonplace due to efficient, cheap methods for SNP identification. Typical genotyping datasets may have thousands to…”
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Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources by Redsun, Sven, Hokin, Sam, Cameron, Connor T, Cleary, Alan M, Berendzen, Joel, Dash, Sudhansu, Brown, Anne V, Wilkey, Andrew, Campbell, Jacqueline D, Huang, Wei, Kalberer, Scott R, Weeks, Nathan T, Cannon, Steven B, Farmer, Andrew D

“…In this chapter, we introduce the main components of the Legume Information System ( https://legumeinfo.org ) and several associated resources. Additionally,…”
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Understanding the molecular regulation of senescence in Glycine max by Brown, Anne V

“…Senescence is the natural process of aging and is a crucial factor in the source-sink relationship. Following germination, the developing soybean seedling…”
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