Search Results - "Brockman, F. J."

Indigenous and contaminant microbes in ultradeep mines by Onstott, T. C., Moser, D. P., Pfiffner, S. M., Fredrickson, J. K., Brockman, F. J., Phelps, T. J., White, D. C., Peacock, A., Balkwill, D., Hoover, R., Krumholz, L. R., Borscik, M., Kieft, T. L., Wilson, R.

“…Summary Rock, air and service water samples were collected for microbial analyses from 3.2 kilometres depth in a working Au mine in the Witwatersrand basin,…”
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Effect of PCR template and concentration on the composition and distribution of total community 16S rDNA clone libraries by Chandler, D.P, Fredrickson, J.K, Brockman, F.J

“…Total DNA from sediment samples was isolated by a direct lysis technique. Purified DNA was used as template either undiluted or diluted 1 : 10 prior to…”
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Phylogenetic Diversity of Archaea and Bacteria in a Deep Subsurface Paleosol by D. P. Chandler, F. J. Brockman, Bailey, T. J., Fredrickson, J. K.

“…A low-biomass paleosol 188 m below the ground surface at the Department of Energy's Hanford Site in south-central Washington State was recovered and maintained…”
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Isolation and characterization of RNA from low-biomass deep-subsurface sediments by Orgram, A. (Washington State University, Pullman, WA.), Sun, W, Brockman, F.J, Frederickson, J.K

“…Three methods for the isolation of microbial RNA from low-biomass deep-subsurface sediments have been developed and evaluated. RNA was isolated from samples…”
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Affinity Purification of DNA and RNA from Environmental Samples with Peptide Nucleic Acid Clamps by CHANDLER, D. P, STULTS, J. R, CEBULA, S, SCHUCK, B. L, WEAVER, D. W, ANDERSON, K. K, EGHOLM, M, BROCKMAN, F. J

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Isolation and Characterization of a Subsurface Bacterium Capable of Growth on Toluene, Naphthalene, and Other Aromatic Compounds by FREDRICKSON, J. K, BROCKMAN, F. J, WORKMAN, D. J, LI, S. W, STEVENS, T. O

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Microbiological comparisons within and across contiguous lacustrine, paleosol, and fluvial subsurface sediments by Kieft, T.L. (New Mexico Institute of Mining and Technology, Socorro, NM.), Fredrickson, J.K, McKinley, J.P, Bjornstad, B.N, Rawson, S.A, Phelps, T.J, Brockman, F.J, Pfiffner, S.M

“…Twenty-six subsurface samples were collected from a borehole at depths of 173.3 to 196.8 m in the saturated zone at the Hanford Site in south-central…”
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Physiological Diversity and Distributions of Heterotrophic Bacteria in Deep Cretaceous Sediments of the Atlantic Coastal Plain by FREDRICKSON, J. K, BALKWILL, D. L, ZACHARA, J. M, LI, S.-M. W, BROCKMAN, F. J, SIMMONS, M. A

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Cloning, sequencing, and analysis of a gene cluster from Chelatobacter heintzii ATCC 29600 encoding nitrilotriacetate monooxygenase and NADH:flavin mononucleotide oxidoreductase by Xu, Y, Mortimer, M W, Fisher, T S, Kahn, M L, Brockman, F J, Xun, L

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Effect of gaseous nitrogen and phosphorus injection on in situ bioremediation of a trichloroethylene-contaminated site by Brockman, F.J., Payne, W., Workman, D.J., Soong, A., Manley, S., Hazen, T.C.

“…Methane and air were injected through a horizontal well into a trichloroethylene-contaminated site at a depth of 160ft below ground surface to stimulate…”
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Post-Sampling Changes in Microbial Community Composition and Activity in a Subsurface Paleosol by F. J. Brockman, S. W. Li, Fredrickson, J. K., D. B. Ringelberg, T. L. Kieft, C. M. Spadoni, White, D. C., J. P. Mc Kinley

“…Laboratory storage of deep vadose zone sediments has previously resulted in an increase in the abundance of cultured microorganisms by as much as 10,000-fold,…”
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Automated nucleic acid isolation and purification from soil extracts using renewable affinity microcolumns in a sequential injection system by Chandler, Darrell P., Schuck, Beatrice L., Brockman, Fred J., Bruckner-Lea, Cynthia J.

“…We have combined affinity purification concepts with novel renewable-surface microcolumns in a sequential injection system for the automated and rapid…”
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Direct Detection of 16S rRNA in Soil Extracts by Using Oligonucleotide Microarrays by SMALL, Jack, CALL, Douglas R, BROCKMAN, Fred J, STRAUB, Timothy M, CHANDLER, Darrell P

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Enumeration of Tn5 mutant bacteria in soil by using a most-probable-number-DNA hybridization procedure and antibiotic resistance by Fredrickson, J.K, Bezdicek, D.F, Brockman, F.J, Li, S.W

“…Investigations were made into the utility of DNA hybridization in conjunction with a microdilution most-probable-number procedure for the enumeration of…”
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Isolation and characterization of quinoline-degrading bacteria from subsurface sediments by BROCKMAN, F. J, DENOVAN, B. A, HICKS, R. J, FREDRICKSON, J. K

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Recruitment and expression of toluene/trichloroethylene biodegradation genes in bacteria native to deep-subsurface sediments by Romine, M.F. (Pacific Northwest National Lab., Richland, WA.), Brockman, F.J

“…Four plasmids, each encoding a combination of either an Escherichia coli or Pseudomonas putida promoter and either toluene dioxygenase or toluene…”
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Detecting and genotyping Escherichia coli O157:H7 using multiplexed PCR and nucleic acid microarrays by Call, Douglas R, Brockman, Fred J, Chandler, Darrell P

“…Rapid detection and characterization of food borne pathogens such as Escherichia coli O157:H7 is crucial for epidemiological investigations and food safety…”
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Diversity within serogroups of Rhizobium leguminosarum biovar viceae in the Palouse region of eastern Washington as indicated by plasmid profiles, intrinsic antibiotic resistance, and topography by Brockman, F.J, Bezdicek, D.F

“…Serology, plasmid profiles, and intrinsic antibiotic resistance (IAR) were determined for 192 isolates of Rhizobium leguminosarum biovar viceae from nodules of…”
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Microbial Abundance and Activities in Relation to Water Potential in the Vadose Zones of Arid and Semiarid Sites by Kieft, Thomas L., Amy, Penny S., Fred J. Brockman, Fredrickson, James K., Bruce N. Bjornstad, Laurie L. Rosacker

“…Numbers and activities of microorganisms were measured in the vadose zones of three arid and semiarid areas of the western United States, and the influence of…”
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Plasmid Incidence in Bacteria from Deep Subsurface Sediments by FREDRICKSON, J. K, HICKS, R. J, LI, S. W, BROCKMAN, F. J

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