Search Results - "Briones, Rodolfo"

Mechanisms of Anion Conduction by Coupled Glutamate Transporters by Machtens, Jan-Philipp, Kortzak, Daniel, Lansche, Christine, Leinenweber, Ariane, Kilian, Petra, Begemann, Birgit, Zachariae, Ulrich, Ewers, David, de Groot, Bert L., Briones, Rodolfo, Fahlke, Christoph

“…Excitatory amino acid transporters (EAATs) are essential for terminating glutamatergic synaptic transmission. They are not only coupled glutamate/Na+/H+/K+…”
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Knowing the enemy: homoacetogens in hydrogen production reactors by Fuentes, Laura, Palomo-Briones, Rodolfo, de Jesús Montoya-Rosales, José, Braga, Lucía, Castelló, Elena, Vesga, Alejandra, Tapia-Venegas, Estela, Razo-Flores, Elías, Ecthebehere, Claudia

“…One of the bottlenecks of the hydrogen production by dark fermentation is the low yields obtained because of the homoacetogenesis persistence, a metabolic…”
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Molecular driving forces defining lipid positions around aquaporin-0 by Aponte-Santamaría, Camilo, Briones, Rodolfo, Schenk, Andreas D, Walz, Thomas, de Groot, Bert L

“…Lipid–protein interactions play pivotal roles in biological membranes. Electron crystallographic studies of the lens-specific water channel aquaporin-0 (AQP0)…”
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Microbial contamination in methanol biofilters inoculated with a pure strain of Pichia pastoris: A potential limitation for waste revalorization by Palomo‐Briones, Rodolfo, Esquivel‐González, Saúl, Aizpuru, Aitor, Gómez‐Hernández, Nicolás, Casas‐Flores, Sergio, Barba de la Rosa, Ana Paulina, Arriaga, Sonia

“…Novel biotechnologies to valorize waste emissions are based on the use of specialized microbial groups that produce different compounds of industrial interest…”
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Functional dynamics in the voltage-dependent anion channel by Villinger, Saskia, Briones, Rodolfo, Giller, Karin, Zachariae, Ulrich, Lange, Adam, de Groot, Bert L., Griesinger, Christian, Becker, Stefan, Zweckstetter, Markus, Gouaux, Eric

“…The voltage-dependent anion channel (VDAC), located in the outer mitochondrial membrane, acts as a gatekeeper for the entry and exit of mitochondrial…”
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Partial Least-Squares Functional Mode Analysis: Application to the Membrane Proteins AQP1, Aqy1, and CLC-ec1 by Krivobokova, Tatyana, Briones, Rodolfo, Hub, Jochen S., Munk, Axel, de Groot, Bert L.

“…We introduce an approach based on the recently introduced functional mode analysis to identify collective modes of internal dynamics that maximally correlate…”
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The membrane anchor of the transcriptional activator SREBP is characterized by intrinsic conformational flexibility by Linser, Rasmus, Salvi, Nicola, Briones, Rodolfo, Rovó, Petra, de Groot, Bert L., Wagner, Gerhard

“…Regulated intramembrane proteolysis (RIP) is a conserved mechanism crucial for numerous cellular processes, including signaling, transcriptional regulation,…”
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Humic substances improve the co-production of hydrogen and carboxylic acids by anaerobic mixed cultures by Núñez-Valenzuela, Paulina, Palomo-Briones, Rodolfo, Cervantes, Francisco J., Razo-Flores, Elías

“…The addition of external redox mediators (e.g., humic substances) as a strategy to enhance the production of H2 and carboxylic acids through mixed-culture dark…”
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Voltage-dependent and -independent titration of specific residues accounts for complex gating of a ClC chloride channel by extracellular protons by Niemeyer, María Isabel, Cid, L. Pablo, Yusef, Yamil R., Briones, Rodolfo, Sepúlveda, Francisco V.

“…The ClC transport protein family comprises both Cl − ion channel and H + /Cl − and H + /NO 3 − exchanger members. Structural studies on a bacterial ClC…”
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Standardized protocol for determination of biohydrogen potential by Carrillo-Reyes, Julián, Buitrón, Germán, Moreno-Andrade, Iván, Tapia-Rodríguez, Aida Cecilia, Palomo-Briones, Rodolfo, Razo-Flores, Elías, Aguilar-Juárez, Oscar, Arreola-Vargas, Jorge, Bernet, Nicolas, Braga, Adriana Ferreira Maluf, Braga, Lucia, Castelló, Elena, Chatellard, Lucile, Etchebehere, Claudia, Fuentes, Laura, León-Becerril, Elizabeth, Méndez-Acosta, Hugo Oscar, Ruiz-Filippi, Gonzalo, Tapia-Venegas, Estela, Trably, Eric, Wenzel, Jorge, Zaiat, Marcelo

“…[Display omitted] Biohydrogen production potential (BHP) depends on several factors like inoculum source, substrate, pH, among many others. Batch assays are…”
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Dark-fermentative biohydrogen pathways and microbial networks in continuous stirred tank reactors: Novel insights on their control by Palomo-Briones, Rodolfo, Razo-Flores, Elías, Bernet, Nicolas, Trably, Eric

“…[Display omitted] •Dark fermentation microbial community was strongly shaped by HRT.•A maximum volumetric hydrogen production rate of 2000mL/L-d was found at…”
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Continuous thermophilic hydrogen production from an enzymatic hydrolysate of agave bagasse: Inoculum origin, homoacetogenesis and microbial community analysis by Montiel-Corona, Virginia, Palomo-Briones, Rodolfo, Razo-Flores, Elías

“…[Display omitted] •One-step acclimation allowed a rapid establishment of a thermophilic community.•The acclimated inoculum allowed higher VHPR than the…”
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GROmaρs: A GROMACS-Based Toolset to Analyze Density Maps Derived from Molecular Dynamics Simulations by Briones, Rodolfo, Blau, Christian, Kutzner, Carsten, de Groot, Bert L., Aponte-Santamaría, Camilo

“…We introduce a computational toolset, named GROmaρs, to obtain and compare time-averaged density maps from molecular dynamics simulations. GROmaρs efficiently…”
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Computational analysis of local membrane properties by Gapsys, Vytautas, de Groot, Bert L., Briones, Rodolfo

“…In the field of biomolecular simulations, dynamics of phospholipid membranes is of special interest. A number of proteins, including channels, transporters,…”
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Advances towards the understanding of microbial communities in dark fermentation of enzymatic hydrolysates: Diversity, structure and hydrogen production performance by Palomo-Briones, Rodolfo, Montoya-Rosales, José de Jesús, Razo-Flores, Elías

“…Microbial communities involved in hydrogen (H2) production from enzymatic hydrolysates of agave bagasse were analyzed through 16S rRNA sequencing. Two types of…”
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Stability problems in the hydrogen production by dark fermentation: Possible causes and solutions by Castelló, Elena, Nunes Ferraz-Junior, Antonio Djalma, Andreani, Cristiane, Anzola-Rojas, Melida del Pilar, Borzacconi, Liliana, Buitrón, Germán, Carrillo-Reyes, Julián, Gomes, Simone Damasceno, Maintinguer, Sandra I., Moreno-Andrade, Iván, Palomo-Briones, Rodolfo, Razo-Flores, Elías, Schiappacasse-Dasati, María, Tapia-Venegas, Estela, Valdez-Vázquez, Idania, Vesga-Baron, Alejandra, Zaiat, Marcelo, Etchebehere, Claudia

“…H2 production by dark fermentation using mixed cultures has been studied intensively during the last two decades, and its feasibility has been demonstrated…”
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Near-neutral pH increased n-caprylate production in a microbiome with product inhibition of methanogenesis by Palomo-Briones, Rodolfo, Xu, Jiajie, Spirito, Catherine M., Usack, Joseph G., Trondsen, Lauren H., Guzman, Juan J.L., Angenent, Largus T.

“…[Display omitted] •The pH was varied for an ethanol-based chain-elongation microbiome with extraction.•Mildly-acidic pH (5–6) led to n-caproate (C6)…”
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ClC-K chloride channels: emerging pathophysiology of Bartter syndrome type 3 by Andrini, Olga, Keck, Mathilde, Briones, Rodolfo, Lourdel, Stéphane, Vargas-Poussou, Rosa, Teulon, Jacques

“…The mutations in the CLCNKB gene encoding the ClC-Kb chloride channel are responsible for Bartter syndrome type 3, one of the four variants of Bartter syndrome…”
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Discontinuous biomass recycling as a successful strategy to enhance continuous hydrogen production at high organic loading rates by Montoya-Rosales, José de Jesús, Palomo-Briones, Rodolfo, Celis, Lourdes B., Etchebehere, Claudia, Razo-Flores, Elías

“…A novel strategy to discontinuously increase the biomass concentration in a continuous stirred-tank reactor was evaluated to enhance the performance of dark…”
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Coping with mass transfer constrains in dark fermentation using a two-phase partitioning bioreactor by Montoya-Rosales, José de Jesús, Palomo-Briones, Rodolfo, Celis, Lourdes B., Etchebehere, Claudia, Cházaro-Ruiz, Luis F., Escobar-Barrios, Vladimir, Razo-Flores, Elías

“…[Display omitted] •Two-phase system reduces inhibition caused by dissolved H2.•Organic extractive phase increases the interfacial area available for mass…”
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