Search Results - "Bretaña, Neil Arvin"

DbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications by Lu, Cheng-Tsung, Huang, Kai-Yao, Su, Min-Gang, Lee, Tzong-Yi, Bretaña, Neil Arvin, Chang, Wen-Chi, Chen, Yi-Ju, Chen, Yu-Ju, Huang, Hsien-Da

“…Protein modification is an extremely important post-translational regulation that adjusts the physical and chemical properties, conformation, stability and…”
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HIV diagnoses in migrant populations in Australia-A changing epidemiology by Gunaratnam, Praveena, Heywood, Anita Elizabeth, McGregor, Skye, Jamil, Muhammad Shahid, McManus, Hamish, Mao, Limin, Lobo, Roanna, Brown, Graham, Hellard, Margaret, Marukutira, Tafireyi, Bretaña, Neil Arvin, Lang, Carolyn, Medland, Nicholas, Bavinton, Benjamin, Grulich, Andrew, Guy, Rebecca

“…We conducted a detailed analysis of trends in new HIV diagnoses in Australia by country of birth, to understand any changes in epidemiology, relationship to…”
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Controlling COVID-19 outbreaks in the correctional setting: A mathematical modelling study by Bretaña, Neil Arvin, Kwon, Jisoo A, Grant, Luke, Galouzis, Jennifer, McGrath, Colette, Hoey, Wendy, Blogg, James, Lloyd, Andrew R, Gray, Richard T

“…Correctional centres (termed here 'prisons') are at high risk of COVID-19 and have featured major outbreaks worldwide. Inevitable close contacts, frequent…”
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Exploiting maximal dependence decomposition to identify conserved motifs from a group of aligned signal sequences by Lee, Tzong-Yi, Lin, Zong-Qing, Hsieh, Sheng-Jen, Bretaña, Neil Arvin, Lu, Cheng-Tsung

“…Bioinformatics research often requires conservative analyses of a group of sequences associated with a specific biological function (e.g. transcription factor…”
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Transmission of Hepatitis C Virus among Prisoners, Australia, 2005-2012 by Bretaña, Neil Arvin, Boelen, Lies, Bull, Rowena, Teutsch, Suzy, White, Peter A, Lloyd, Andrew R, Luciani, Fabio

“…Hepatitis C virus (HCV) is predominantly transmitted between persons who inject drugs. For this population, global prevalence of HCV infection is high and…”
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Identifying protein phosphorylation sites with kinase substrate specificity on human viruses by Bretaña, Neil Arvin, Lu, Cheng-Tsung, Chiang, Chiu-Yun, Su, Min-Gang, Huang, Kai-Yao, Lee, Tzong-Yi, Weng, Shun-Long

“…Viruses infect humans and progress inside the body leading to various diseases and complications. The phosphorylation of viral proteins catalyzed by host…”
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Incorporating evolutionary information and functional domains for identifying RNA splicing factors in humans by Hsu, Justin Bo-Kai, Bretaña, Neil Arvin, Lee, Tzong-Yi, Huang, Hsien-Da

“…Regulation of pre-mRNA splicing is achieved through the interaction of RNA sequence elements and a variety of RNA-splicing related proteins (splicing factors)…”
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Aging of the HIV Population in Australia: A Modeling Study by Bretaña, Neil Arvin, Gray, Richard, Law, Matthew, Guy, Rebecca

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A prospective study of hepatitis C incidence in Australian prisoners by Luciani, Fabio, Bretaña, Neil Arvin, Teutsch, Suzy, Amin, Janaki, Topp, Libby, Dore, Gregory J., Maher, Lisa, Dolan, Kate, Lloyd, Andrew R.

“…Aims To document the relationships between injecting drug use, imprisonment and hepatitis C virus (HCV) infection. Design Prospective cohort study. Setting…”
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A two-layered machine learning method to identify protein O-GlcNAcylation sites with O-GlcNAc transferase substrate motifs by Kao, Hui-Ju, Huang, Chien-Hsun, Bretaña, Neil Arvin, Lu, Cheng-Tsung, Huang, Kai-Yao, Weng, Shun-Long, Lee, Tzong-Yi

“…Protein O-GlcNAcylation, involving the β-attachment of single N-acetylglucosamine (GlcNAc) to the hydroxyl group of serine or threonine residues, is an…”
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PlantPhos: using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity by Lee, Tzong-Yi, Bretaña, Neil Arvin, Lu, Cheng-Tsung

“…Protein phosphorylation catalyzed by kinases plays crucial regulatory roles in intracellular signal transduction. Due to the difficulty in performing…”
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Characterization and identification of ubiquitin conjugation sites with E3 ligase recognition specificities by Nguyen, Van-Nui, Huang, Kai-Yao, Huang, Chien-Hsun, Chang, Tzu-Hao, Bretaña, Neil, Lai, K, Weng, Julia, Lee, Tzong-Yi

“…In eukaryotes, ubiquitin-conjugation is an important mechanism underlying proteasome-mediated degradation of proteins, and as such, plays an essential role in…”
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ViralPhos: incorporating a recursively statistical method to predict phosphorylation sites on virus proteins by Huang, Kai-Yao, Lu, Cheng-Tsung, Bretaña, Neil, Lee, Tzong-Yi, Chang, Tzu-Hao

“…The phosphorylation of virus proteins by host kinases is linked to viral replication. This leads to an inhibition of normal host-cell functions. Further…”
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Carboxylator: incorporating solvent-accessible surface area for identifying protein carboxylation sites by Lu, Cheng-Tsung, Chen, Shu-An, Bretaña, Neil Arvin, Cheng, Tzu-Hsiu, Lee, Tzong-Yi

“…In proteins, glutamate (Glu) residues are transformed into γ-carboxyglutamate (Gla) residues in a process called carboxylation. The process of protein…”
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Investigation and identification of protein γ-glutamyl carboxylation sites by Lee, Tzong-Yi, Lu, Cheng-Tsung, Chen, Shu-An, Bretaña, Neil Arvin, Cheng, Tzu-Hsiu, Su, Min-Gang, Huang, Kai-Yao

“…Carboxylation is a modification of glutamate (Glu) residues which occurs post-translation that is catalyzed by γ-glutamyl carboxylase in the lumen of the…”
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Investigation and identification of protein [gamma]-glutamyl carboxylation sites by Lee, Tzong-Yi, Lu, Cheng-Tsung, Chen, Shu-An, Bretaña, Neil Arvin, Cheng, Tzu-Hsiu, Su, Min-Gang, Huang, Kai-Yao

“…Abstract Background: Carboxylation is a modification of glutamate (Glu) residues which occurs post-translation that is catalyzed by γ-glutamyl carboxylase in…”
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