Search Results - "Branca, Rui Mamede"
-
1
A suicidal and extensively disordered luciferase with a bright luminescence
Published in Protein science (01-08-2024)“…Gaussia luciferase (GLuc) is one of the most luminescent luciferases known and is widely used as a reporter in biochemistry and cell biology. During catalysis,…”
Get full text
Journal Article -
2
Altered Protein Composition of Subcutaneous Adipose Tissue in Chronic Kidney Disease
Published in Kidney international reports (01-11-2017)“…Loss of renal function is associated with high mortality from cardiovascular disease (CVD). Patients with chronic kidney disease (CKD) have altered circulating…”
Get full text
Journal Article -
3
Comparative proteomics reveals signature metabolisms of exponentially growing and stationary phase marine bacteria
Published in Environmental microbiology (01-06-2017)“…Summary Much of the phenotype of a microorganism consists of its repertoire of metabolisms and how and when its proteins are deployed under different growth…”
Get full text
Journal Article -
4
De novo sequencing of a 21-kDa cytochrome c4 from Thiocapsa roseopersicina by nanoelectrospray ionization ion-trap and Fourier-transform ion-cyclotron resonance mass spectrometry
Published in Journal of mass spectrometry (01-12-2007)“…We have determined the primary structure of cytochrome c4 from Thiocapsa roseopersicina by de novo protein sequencing using the ‘bottom up’ approach. Three…”
Get full text
Journal Article Conference Proceeding -
5
Theoretical Calculations on Hydrogenase Kinetics: Explanation of the Lag Phase and the Enzyme Concentration Dependence of the Activity of Hydrogenase Uptake
Published in Biophysical journal (01-09-2005)“…Two models of the hydrogenase reaction cycle were investigated by means of theoretical calculations and model simulations. The first model is the widely…”
Get full text
Journal Article -
6
Tumor Proteomics by Multivariate Analysis on Individual Pathway Data for Characterization of Vulvar Cancer Phenotypes
Published in Molecular & cellular proteomics (01-07-2012)“…Vulvar squamous cell carcinoma (VSCC) is the fourth most common gynecological cancer. Based on etiology VSCC is divided into two subtypes; one related to…”
Get full text
Journal Article -
7
Domain expertise–agnostic feature selection for the analysis of breast cancer data
Published in Artificial intelligence in medicine (01-08-2020)“…•We propose a three-step wrapper method for the discovery of connected protein networks underlying particular molecular and cellular processes which…”
Get full text
Journal Article -
8
Harnessing T cell exhaustion and trogocytosis to isolate patient-derived tumor-specific TCR
Published in Science advances (01-12-2023)“…To study and then harness the tumor-specific T cell dynamics after allogeneic hematopoietic stem cell transplant, we typed the frequency, phenotype, and…”
Get full text
Journal Article -
9
Alterations in the membrane-associated proteome fraction of alveolar macrophages in sarcoidosis
Published in Sarcoidosis, vasculitis, and diffuse lung diseases (01-01-2016)“…Alveolar macrophages are implicated in the pathogenesis of lung sarcoidosis. Their interaction with T-cells leads to an inflammatory response that may either…”
Get full text
Journal Article -
10
Mesenchymal state of intimal cells may explain higher propensity to ascending aortic aneurysm in bicuspid aortic valves
Published in Scientific reports (25-10-2016)“…Individuals with a bicuspid aortic valve (BAV) are at significantly higher risk of developing aortic complications than individuals with tricuspid aortic…”
Get full text
Journal Article -
11
A Combined Proteomic and Transcriptomic Approach Shows Diverging Molecular Mechanisms in Thoracic Aortic Aneurysm Development in Patients with Tricuspid- And Bicuspid Aortic Valve
Published in Molecular & cellular proteomics (01-02-2013)“…Thoracic aortic aneurysm is a pathological local dilatation of the aorta, potentially leading to aortic rupture or dissection. The disease is a common…”
Get full text
Journal Article -
12
De novo sequencing of a 21‐kDa cytochrome c 4 from Thiocapsa roseopersicina by nanoelectrospray ionization ion‐trap and Fourier‐transform ion‐cyclotron resonance mass spectrometry
Published in Journal of mass spectrometry. (01-12-2007)“…Abstract We have determined the primary structure of cytochrome c 4 from Thiocapsa roseopersicina by de novo protein sequencing using the ‘bottom up’ approach…”
Get full text
Journal Article -
13
novo sequencing of a 21-kDa cytochrome c₄ from Thiocapsa roseopersicina by nanoelectrospray ionization ion-trap and Fourier-transform ion-cyclotron resonance mass spectrometry
Published in Journal of mass spectrometry. (2007)“…We have determined the primary structure of cytochrome c₄ from Thiocapsa roseopersicina by de novo protein sequencing using the 'bottom up' approach. Three…”
Get full text
Journal Article -
14
Structure and Function of a Novel Cytochrome c4from the Purple Photosynthetic Bacterium Thiocapsa Roseopersicina
Published 01-01-2008“…IntroductionIn the present work, we discuss the discovery and study of a novel cytochrome c from the purple sulfur bacterium Thiocapsa roseopersicina. We have…”
Get full text
Dissertation -
15
Cross-crystallization method used for the crystallization and preliminary diffraction analysis of a novel di-haem cytochrome c{sub 4}
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-08-2006)“…Cross crystallization is reported as a new crystallization procedure used for growing protein crystals and preliminary diffraction analysis of a newly…”
Get full text
Journal Article -
16
Cross-crystallization method used for the crystallization and preliminary diffraction analysis of a novel di-haem cytochrome c4
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-08-2006)“…The newly discovered di‐haem cytochrome c4 from the purple sulfur photosynthetic bacterium Thiocapsa roseopersicina is the first cytochrome c4 to be…”
Get full text
Journal Article -
17
Cross-crystallization method used for the crystallization and preliminary diffraction analysis of a novel di-haem cytochrome c 4
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-08-2006)“…Cross crystallization is reported as a new crystallization procedure used for growing protein crystals and preliminary diffraction analysis of a newly…”
Get full text
Journal Article