Search Results - "Boucher, Wayne"

3D structures of individual mammalian genomes studied by single-cell Hi-C by Stevens, Tim J., Lando, David, Basu, Srinjan, Atkinson, Liam P., Cao, Yang, Lee, Steven F., Leeb, Martin, Wohlfahrt, Kai J., Boucher, Wayne, O’Shaughnessy-Kirwan, Aoife, Cramard, Julie, Faure, Andre J., Ralser, Meryem, Blanco, Enrique, Morey, Lluis, Sansó, Miriam, Palayret, Matthieu G. S., Lehner, Ben, Di Croce, Luciano, Wutz, Anton, Hendrich, Brian, Klenerman, Dave, Laue, Ernest D.

“…The folding of genomic DNA from the beads-on-a-string-like structure of nucleosomes into higher-order assemblies is crucially linked to nuclear processes. Here…”
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The CCPN data model for NMR spectroscopy: Development of a software pipeline by Vranken, Wim F., Boucher, Wayne, Stevens, Tim J., Fogh, Rasmus H., Pajon, Anne, Llinas, Miguel, Ulrich, Eldon L., Markley, John L., Ionides, John, Laue, Ernest D.

“…To address data management and data exchange problems in the nuclear magnetic resonance (NMR) community, the Collaborative Computing Project for the NMR…”
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High-Resolution Heteronuclear Multidimensional NMR of Proteins in Living Insect Cells Using a Baculovirus Protein Expression System by Hamatsu, Jumpei, O’Donovan, Daniel, Tanaka, Takashi, Shirai, Takahiro, Hourai, Yuichiro, Mikawa, Tsutomu, Ikeya, Teppei, Mishima, Masaki, Boucher, Wayne, Smith, Brian O, Laue, Ernest D, Shirakawa, Masahiro, Ito, Yutaka

“…Recent developments in in-cell NMR techniques have allowed us to study proteins in detail inside living eukaryotic cells. In order to complement the existing…”
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FRET-enhanced photostability allows improved single-molecule tracking of proteins and protein complexes in live mammalian cells by Basu, Srinjan, Needham, Lisa-Maria, Lando, David, Taylor, Edward J. R., Wohlfahrt, Kai J., Shah, Devina, Boucher, Wayne, Tan, Yi Lei, Bates, Lawrence E., Tkachenko, Olga, Cramard, Julie, Lagerholm, B. Christoffer, Eggeling, Christian, Hendrich, Brian, Klenerman, Dave, Lee, Steven F., Laue, Ernest D.

“…A major challenge in single-molecule imaging is tracking the dynamics of proteins or complexes for long periods of time in the dense environments found in…”
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Citrullination of HP1γ chromodomain affects association with chromatin by Wiese, Meike, Bannister, Andrew J, Basu, Srinjan, Boucher, Wayne, Wohlfahrt, Kai, Christophorou, Maria A, Nielsen, Michael L, Klenerman, David, Laue, Ernest D, Kouzarides, Tony

“…Stem cell differentiation involves major chromatin reorganisation, heterochromatin formation and genomic relocalisation of structural proteins, including…”
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The CCPN Metabolomics Project: a fast protocol for metabolite identification by 2D-NMR by CHIGNOLA, Francesca, MARI, Silvia, STEVENS, Tim J, FOGH, Rasmus H, MANNELLA, Valeria, BOUCHER, Wayne, MUSCO, Giovanna

“…We present here the freely available Metabolomics Project resource specifically designed to work under the CcpNmr Analysis program produced by CCPN…”
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Treatment of Mental or Physical Health Problems in a Combat Zone: Comparisons of Postdeployment Mental Health and Early Separation From Service by Conway, Terry L., Schmied, Emily A., Larson, Gerald E., Galarneau, Michael R., Hammer, Paul S., Quinn, Kimberly H., Schmitz, Kimberly J., Webb-Murphy, Jennifer A., Boucher, Wayne C., Edwards, Nathan K., Ly, Hoa L.

“…The primary aim of this study was to evaluate whether being treated for mental health or nonbattle physical injury during military combat deployment was…”
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Psychiatric diagnoses and treatment of U.S. military personnel while deployed to Iraq by Schmitz, Kimberly J, Schmied, Emily A, Webb-Murphy, Jennifer A, Hammer, Paul S, Larson, Gerald E, Conway, Terry L, Galarneau, Michael R, Boucher, Wayne C, Edwards, Nathan K, Johnson, Douglas C

“…Military personnel deployed in support of combat operations are at significantly higher risk for mental health problems. However, much of what we know about…”
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The CCPN project: an interim report on a data model for the NMR community by Laue, Ernest, Fogh, Rasmus, Ionides, John, Ulrich, Eldon, Boucher, Wayne, Vranken, Wim, Linge, Jens P, Habeck, Michael, Rieping, Wolfgang, Bhat, T.N, Westbrook, John, Henrick, Kim, Gilliland, Gary, Berman, Helen, Thornton, Janet, Nilges, Michael, Markley, John

“…A recent workshop discusses the progress toward integrating NMR data into a unifying data model…”
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Theater Mental Health Encounter Data (TMHED): overview of study design and methods by Conway, Terry L, Hammer, Paul S, Galarneau, Michael R, Larson, Gerald E, Edwards, Nathan K, Schmied, Emily A, Ly, Hoa L, Schmitz, Kimberly J, Webb-Murphy, Jennifer A, Boucher, Wayne C, Johnson, Douglas C, Ghaed, Shiva G

“…Research has documented higher risks for mental health problems among service members deployed to war zones, yet a research limitation has been that assessment…”
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MEMOPS: Data modelling and automatic code generation by Fogh, Rasmus H., Boucher, Wayne, Ionides, John M.C., Vranken, Wim F., Stevens, Tim J., Laue, Ernest D.

“…In recent years the amount of biological data has exploded to the point where much useful information can only be extracted by complex computational analyses…”
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CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis by Skinner, Simon P., Fogh, Rasmus H., Boucher, Wayne, Ragan, Timothy J., Mureddu, Luca G., Vuister, Geerten W.

“…NMR spectroscopy is an indispensably powerful technique for the analysis of biomolecules under ambient conditions, both for structural- and functional studies…”
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Structure calculation, refinement and validation using CcpNmr Analysis by Skinner, Simon P., Goult, Benjamin T., Fogh, Rasmus H., Boucher, Wayne, Stevens, Tim J., Laue, Ernest D., Vuister, Geerten W.

“…CcpNmr Analysis provides a streamlined pipeline for both NMR chemical shift assignment and structure determination of biological macromolecules. In addition,…”
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A software framework for analysing solid-state MAS NMR data by Stevens, Tim J., Fogh, Rasmus H., Boucher, Wayne, Higman, Victoria A., Eisenmenger, Frank, Bardiaux, Benjamin, van Rossum, Barth-Jan, Oschkinat, Hartmut, Laue, Ernest D.

“…Solid-state magic-angle-spinning (MAS) NMR of proteins has undergone many rapid methodological developments in recent years, enabling detailed studies of…”
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Combining fluorescence imaging with Hi-C to study 3D genome architecture of the same single cell by Lando, David, Basu, Srinjan, Stevens, Tim J, Riddell, Andy, Wohlfahrt, Kai J, Cao, Yang, Boucher, Wayne, Leeb, Martin, Atkinson, Liam P, Lee, Steven F, Hendrich, Brian, Klenerman, Dave, Laue, Ernest D

“…This protocol shows how to combine fluorescence imaging with single-cell Hi-C, to study genome architecture in single cells with high resolution. Fluorescence…”
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Citrullination of HP1[gamma] chromodomain affects association with chromatin by Wiese, Meike, Bannister, Andrew J, Basu, Srinjan, Boucher, Wayne, Wohlfahrt, Kai, Christophorou, Maria A, Nielsen, Michael L, Klenerman, David, Laue, Ernest D, Kouzarides, Tony

“…Stem cell differentiation involves major chromatin reorganisation, heterochromatin formation and genomic relocalisation of structural proteins, including…”
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3D structure of individual mammalian genomes studied by single cell Hi-C by Stevens, Tim J., Lando, David, Basu, Srinjan, Atkinson, Liam P., Cao, Yang, Lee, Steven F., Leeb, Martin, Wohlfahrt, Kai J., Boucher, Wayne, O’Shaughnessy-Kirwan, Aoife, Cramard, Julie, Faure, Andre J., Ralser, Meryem, Blanco, Enrique, Morey, Lluis, Sansó, Miriam, Palayret, Matthieu G. S., Lehner, Ben, Di Croce, Luciano, Wutz, Anton, Hendrich, Brian, Klenerman, Dave, Laue, Ernest D.

“…The folding of genomic DNA from the beads-on-a-string like structure of nucleosomes into higher order assemblies is critically linked to nuclear processes. We…”
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Erratum to: CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis by Skinner, Simon P., Fogh, Rasmus H., Boucher, Wayne, Ragan, Timothy J., Mureddu, Luca G., Vuister, Geerten W.

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nomenclature and data model to describe NMR experiments by Fogh, Rasmus H, Vranken, Wim F, Boucher, Wayne, Stevens, Tim J, Laue, Ernest D

“…Despite ongoing efforts in organising NMR information, there is no consistent and well-described generic standard for naming NMR experiments. The main reason…”
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A framework for scientific data modeling and automated software development by Fogh, Rasmus H., Boucher, Wayne, Vranken, Wim F., Pajon, Anne, Stevens, Tim J., Bhat, T. N., Westbrook, John, Ionides, John M. C., Laue, Ernest D.

“…Motivation: The lack of standards for storage and exchange of data is a serious hindrance for the large-scale data deposition, data mining and program…”
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