Search Results - "Bothner, Brian"

Aerobic bacterial methane synthesis by Wang, Qian, Alowaifeer, Abdullah, Kerner, Patricia, Balasubramanian, Narayanaganesh, Patterson, Angela, Christian, William, Tarver, Angela, Dore, John E., Hatzenpichler, Roland, Bothner, Brian, McDermott, Timothy R.

“…Reports of biogenic methane (CH₄) synthesis associated with a range of organisms have steadily accumulated in the literature. This has not happened without…”
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New Technologies for Studying Biofilms by Franklin, Michael J, Chang, Connie, Akiyama, Tatsuya, Bothner, Brian

“…Bacteria have traditionally been studied as single-cell organisms. In laboratory settings, aerobic bacteria are usually cultured in aerated flasks, where the…”
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Structure and Dynamics of Adeno-Associated Virus Serotype 1 VP1-Unique N-Terminal Domain and Its Role in Capsid Trafficking by Venkatakrishnan, Balasubramanian, Yarbrough, Joseph, Domsic, John, Bennett, Antonette, Bothner, Brian, Kozyreva, Olga G., Samulski, R. Jude, Muzyczka, Nicholas, McKenna, Robert, Agbandje-McKenna, Mavis

“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Hepatitis B Virus Core Protein Phosphorylation Sites Affect Capsid Stability and Transient Exposure of the C-terminal Domain by Selzer, Lisa, Kant, Ravi, Wang, Joseph C.-Y., Bothner, Brian, Zlotnick, Adam

“…Hepatitis B virus core protein has 183 amino acids divided into an assembly domain and an arginine-rich C-terminal domain (CTD) that regulates essential…”
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Comparative Analysis of Adeno-Associated Virus Capsid Stability and Dynamics by Rayaprolu, Vamseedhar, Kruse, Shannon, Kant, Ravi, Venkatakrishnan, Balasubramanian, Movahed, Navid, Brooke, Dewey, Lins, Bridget, Bennett, Antonette, Potter, Timothy, McKenna, Robert, Agbandje-McKenna, Mavis, Bothner, Brian

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Acute stress reduces population-level metabolic and proteomic variation by Steward, Katherine F, Refai, Mohammed, Dyer, William E, Copié, Valérie, Lachowiec, Jennifer, Bothner, Brian

“…Variation in omics data due to intrinsic biological stochasticity is often viewed as a challenging and undesirable feature of complex systems analyses. In…”
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An Aurora B-RPA signaling axis secures chromosome segregation fidelity by Roshan, Poonam, Kuppa, Sahiti, Mattice, Jenna R., Kaushik, Vikas, Chadda, Rahul, Pokhrel, Nilisha, Tumala, Brunda R., Biswas, Aparna, Bothner, Brian, Antony, Edwin, Origanti, Sofia

“…Errors in chromosome segregation underlie genomic instability associated with cancers. Resolution of replication and recombination intermediates and protection…”
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Demonstration of Protein-Based Human Identification Using the Hair Shaft Proteome by Parker, Glendon J, Leppert, Tami, Anex, Deon S, Hilmer, Jonathan K, Matsunami, Nori, Baird, Lisa, Stevens, Jeffery, Parsawar, Krishna, Durbin-Johnson, Blythe P, Rocke, David M, Nelson, Chad, Fairbanks, Daniel J, Wilson, Andrew S, Rice, Robert H, Woodward, Scott R, Bothner, Brian, Hart, Bradley R, Leppert, Mark

“…Human identification from biological material is largely dependent on the ability to characterize genetic polymorphisms in DNA. Unfortunately, DNA can degrade…”
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Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes by Deveryshetty, Jaigeeth, Chadda, Rahul, Mattice, Jenna R., Karunakaran, Simrithaa, Rau, Michael J., Basore, Katherine, Pokhrel, Nilisha, Englander, Noah, Fitzpatrick, James A. J., Bothner, Brian, Antony, Edwin

“…Homologous recombination (HR) is an essential double-stranded DNA break repair pathway. In HR, Rad52 facilitates the formation of Rad51 nucleoprotein filaments…”
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Rtt105 regulates RPA function by configurationally stapling the flexible domains by Kuppa, Sahiti, Deveryshetty, Jaigeeth, Chadda, Rahul, Mattice, Jenna R., Pokhrel, Nilisha, Kaushik, Vikas, Patterson, Angela, Dhingra, Nalini, Pangeni, Sushil, Sadauskas, Marisa K., Shiekh, Sajad, Balci, Hamza, Ha, Taekjip, Zhao, Xiaolan, Bothner, Brian, Antony, Edwin

“…Replication Protein A (RPA) is a heterotrimeric complex that binds to single-stranded DNA (ssDNA) and recruits over three dozen RPA-interacting proteins to…”
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Metalloproteomics Reveals Multi-Level Stress Response in Escherichia coli When Exposed to Arsenite by Larson, James, Sather, Brett, Wang, Lu, Westrum, Jade, Tokmina-Lukaszewska, Monika, Pauley, Jordan, Copié, Valérie, McDermott, Timothy R, Bothner, Brian

“…The operon encodes a three-protein arsenic resistance system. ArsR regulates the transcription of the operon, while ArsB and ArsC are involved in exporting…”
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Gut microbiome dysbiosis drives metabolic dysfunction in Familial dysautonomia by Cheney, Alexandra M., Costello, Stephanann M., Pinkham, Nicholas V., Waldum, Annie, Broadaway, Susan C., Cotrina-Vidal, Maria, Mergy, Marc, Tripet, Brian, Kominsky, Douglas J., Grifka-Walk, Heather M., Kaufmann, Horacio, Norcliffe-Kaufmann, Lucy, Peach, Jesse T., Bothner, Brian, Lefcort, Frances, Copié, Valérie, Walk, Seth T.

“…Familial dysautonomia (FD) is a rare genetic neurologic disorder caused by impaired neuronal development and progressive degeneration of both the peripheral…”
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Introducing the ArsR-Regulated Arsenic Stimulon by Rawle, Rachel, Saley, Tara C, Kang, Yoon-Suk, Wang, Qian, Walk, Seth, Bothner, Brian, McDermott, Timothy R

“…The microbial operon encodes the primary bacterial defense response to the environmental toxicant, arsenic. An important component of this operon is the gene,…”
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Thermal Stability as a Determinant of AAV Serotype Identity by Bennett, Antonette, Patel, Saajan, Mietzsch, Mario, Jose, Ariana, Lins-Austin, Bridget, Yu, Jennifer C, Bothner, Brian, McKenna, Robert, Agbandje-McKenna, Mavis

“…Currently, there are over 150 ongoing clinical trials utilizing adeno-associated viruses (AAVs) to target various genetic diseases, including hemophilia (AAV2…”
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Arsenite oxidase also functions as an antimonite oxidase by Wang, Qian, Warelow, Thomas P, Kang, Yoon-Suk, Romano, Christine, Osborne, Thomas H, Lehr, Corinne R, Bothner, Brian, McDermott, Timothy R, Santini, Joanne M, Wang, Gejiao

“…Arsenic and antimony are toxic metalloids and are considered priority environmental pollutants by the U.S. Environmental Protection Agency. Significant…”
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Longitudinal analysis of the Five Sisters hot springs in Yellowstone National Park reveals a dynamic thermoalkaline environment by Peach, Jesse T., Mueller, Rebecca C., Skorupa, Dana J., Mesle, Margaux M., Kanta, Sutton, Boltinghouse, Eric, Sharon, Bailey, Copié, Valerie, Bothner, Brian, Peyton, Brent M.

“…Research focused on microbial populations of thermoalkaline springs has been driven in a large part by the lure of discovering functional enzymes with…”
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Metabolic Implications of Using BioOrthogonal Non-Canonical Amino Acid Tagging (BONCAT) for Tracking Protein Synthesis by Steward, Katherine F, Eilers, Brian, Tripet, Brian, Fuchs, Amanda, Dorle, Michael, Rawle, Rachel, Soriano, Berliza, Balasubramanian, Narayanaganesh, Copié, Valérie, Bothner, Brian, Hatzenpichler, Roland

“…BioOrthogonal Non-Canonical Amino acid Tagging (BONCAT) is a powerful tool for tracking protein synthesis on the level of single cells within communities and…”
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Regulatory Activities of Four ArsR Proteins in Agrobacterium tumefaciens 5A by Kang, Yoon-Suk, Brame, Keenan, Jetter, Jonathan, Bothner, Brian B, Wang, Gejiao, Thiyagarajan, Saravanamuthu, McDermott, Timothy R

“…ArsR is a well-studied transcriptional repressor that regulates microbe-arsenic interactions. Most microorganisms have an arsR gene, but in cases where…”
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Mechanical coupling in the nitrogenase complex by Huang, Qi, Tokmina-Lukaszewska, Monika, Johnson, Lewis E, Kallas, Hayden, Ginovska, Bojana, Peters, John W, Seefeldt, Lance C, Bothner, Brian, Raugei, Simone

“…The enzyme nitrogenase reduces dinitrogen to ammonia utilizing electrons, protons, and energy obtained from the hydrolysis of ATP. Mo-dependent nitrogenase is…”
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Untargeted metabolomics profiling of oat ( Avena sativa L.) and wheat ( Triticum aestivum L.) infested with wheat stem sawfly ( Cephus cinctus Norton) reveals differences associated with plant defense and insect nutrition by Hager, Megan S, Hofland, Megan L, Varella, Andrea C, Bothner, Brian, Budak, Hikmet, Weaver, David K

“…Wheat stem sawfly (WSS), Cephus cinctus Norton, is a major pest of common bread wheat (Triticum aestivum L.) and other cultivated cereals in North America…”
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