Search Results - "Bonizzoni, Paola"

PangeBlocks: customized construction of pangenome graphs via maximal blocks by Avila Cartes, Jorge, Bonizzoni, Paola, Ciccolella, Simone, Della Vedova, Gianluca, Denti, Luca

“…Abstract Background The construction of a pangenome graph is a fundamental task in pangenomics. A natural theoretical question is how to formalize the…”
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Membership intermediaries: a study of pluri-generational mixed-status families in Italy and France by Bonizzoni, Paola, Fresnoza-Flot, Asuncion

“…Insider family citizens—that is, people who, according to their nationality/legal status and the possession of crucial resources for the settlement of their…”
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How religion shapes immigrants’ integration: The case of Christian migrant churches in Italy by Ambrosini, Maurizio, Bonizzoni, Paola, Molli, Samuele Davide

“…This article investigates the relationship between integration processes and religious participation through an analysis of migrant churches established in the…”
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MALVIRUS: an integrated application for viral variant analysis by Ciccolella, Simone, Denti, Luca, Bonizzoni, Paola, Della Vedova, Gianluca, Pirola, Yuri, Previtali, Marco

“…Being able to efficiently call variants from the increasing amount of sequencing data daily produced from multiple viral strains is of the utmost importance,…”
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Migration and Legal Precarity in the Time of Pandemic: Qualitative Research on the Italian Case by Bonizzoni, Paola, Dotsey, Senyo

“…The COVID-19 pandemic has unequally impacted the lives of Italian subjects. The article uses evidence from forty-seven semi-structured interviews with various…”
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Politicising the Amnesty: Struggles for Migrants' Legality during a Pandemic by Bonizzoni, Paola, Minke Hajer

“…The 2020 regularisation for irregular migrant workers in Italy relied extensively on civil society actors' (CSAs) involvement to provide information, legal…”
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ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events by Denti, Luca, Rizzi, Raffaella, Beretta, Stefano, Vedova, Gianluca Della, Previtali, Marco, Bonizzoni, Paola

“…While the reconstruction of transcripts from a sample of RNA-Seq data is a computationally expensive and complicated task, the detection of splicing events…”
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gpps: an ILP-based approach for inferring cancer progression with mutation losses from single cell data by Ciccolella, Simone, Soto Gomez, Mauricio, Patterson, Murray D, Della Vedova, Gianluca, Hajirasouliha, Iman, Bonizzoni, Paola

“…Cancer progression reconstruction is an important development stemming from the phylogenetics field. In this context, the reconstruction of the phylogeny…”
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HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads by Beretta, Stefano, Patterson, Murray D, Zaccaria, Simone, Della Vedova, Gianluca, Bonizzoni, Paola

“…Haplotype assembly is the process of assigning the different alleles of the variants covered by mapped sequencing reads to the two haplotypes of the genome of…”
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MALVA: Genotyping by Mapping-free ALlele Detection of Known VAriants by Denti, Luca, Previtali, Marco, Bernardini, Giulia, Schönhuth, Alexander, Bonizzoni, Paola

“…The amount of genetic variation discovered in human populations is growing rapidly leading to challenging computational tasks, such as variant calling…”
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Further steps in TANGO: improved taxonomic assignment in metagenomics by Alonso-Alemany, Daniel, Barré, Aurélien, Beretta, Stefano, Bonizzoni, Paola, Nikolski, Macha, Valiente, Gabriel

“…TANGO is one of the most accurate tools for the taxonomic assignment of sequence reads. However, because of the differences in the taxonomy structures,…”
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On the parameterized complexity of the repetition free longest common subsequence problem by Blin, Guillaume, Bonizzoni, Paola, Dondi, Riccardo, Sikora, Florian

“…Longest common subsequence is a widely used measure to compare strings, in particular in computational biology. Recently, several variants of the longest…”
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Variants of constrained longest common subsequence by Bonizzoni, Paola, Della Vedova, Gianluca, Dondi, Riccardo, Pirola, Yuri

“…We consider a variant of the classical Longest Common Subsequence problem called Doubly-Constrained Longest Common Subsequence ( DC-LCS). Given two strings s 1…”
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A Clustering Algorithm for Planning the Integration Process of a Large Number of Conceptual Schemas by Batini, Carlo, Bonizzoni, Paola, Comerio, Marco, Dondi, Riccardo, Pirola, Yuri, Salandra, Francesco

“…When tens and even hundreds of schemas are involved in the integration process, criteria are needed for choosing clusters of schemas to be integrated, so as to…”
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The shifting boundaries of (un)documentedness: a gendered understanding of migrants' employment-based legalization pathways in Italy by Bonizzoni, Paola

“…The paper provides a qualitative exploration of the experiences of migrants who have engaged in the last employment-based amnesties in Italy. To cross the…”
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Maximum Disjoint Paths on Edge-Colored Graphs: Approximability and Tractability by Bonizzoni, Paola, Dondi, Riccardo, Pirola, Yuri

“…The problem of finding the maximum number of vertex-disjoint uni-color paths in an edge-colored graph has been recently introduced in literature, motivated by…”
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Homeless or refugee? Civil Society Actors and the (un)making of internal borders in an Italian frontier town by Bonizzoni, Paola, Dimitriadis, Iraklis

“…Migrants' access to the national territory is filtered through categorisation processes that entangle the legal-administrative statuses produced by immigration…”
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Shifting Geographical Configurations in Migrant Families: Narratives of Children Reunited with their Mothers in Italy by Bonizzoni, Paola, Leonini, Luisa

“…The article explores the experiences of separation and reunification by children of migrant mothers in Italy by analysing 32 qualitative interviews conducted…”
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Here or There? Shifting Meanings and Practices in Mother-Child Relationships across Time and Space by Bonizzoni, Paola

“…In this paper, I analyse the changes that mothers and children experience in their relationship due to the physical separations and reunions entailed by the…”
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Looking for the Best and Brightest? Deservingness Regimes in Italian Labour Migration Management by Bonizzoni, Paola

“…It is often maintained that contemporary foreign labour recruitment programs have taken an increasingly selective stance and that skills are increasingly…”
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