Search Results - "Blattner, F R"

Extensive Mosaic Structure Revealed by the Complete Genome Sequence of Uropathogenic Escherichia coli by Welch, R. A., Burland, V., Plunkett, G., Redford, P., Roesch, P., Rasko, D., Buckles, E. L., S.-R. Liou, Boutin, A., Hackett, J., Stroud, D., Mayhew, G. F., Rose, D. J., Zhou, S., Schwartz, D. C., Perna, N. T., Mobley, H. L. T., Donnenberg, M. S., Blattner, F. R.

“…We present the complete genome sequence of uropathogenic Escherichia coli, strain CFT073. A three-way genome comparison of the CFT073, enterohemorrhagic E…”
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Complete Genome Sequence and Comparative Genomics of Shigella flexneri Serotype 2a Strain 2457T by WEI, J, GOLDBERG, M. B, MAU, B, PERNA, N. T, PAYNE, S. M, RUNYEN-JANECKY, L. J, ZHOU, S, SCHWARTZ, D. C, BLATTNER, F. R, BURLAND, V, VENKATESAN, M. M, DENG, W, FOURNIER, G, MAYHEW, G. F, PLUNKETT, G. III, ROSE, D. J, DARLING, A

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Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR by Blattner, F R

“…Sequences of the internal transcribed spacers (ITS) of the nuclear ribosomal DNA are important molecular markers in phylogenetic analyses. To obtain sequences…”
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Molecular data indicate multiple independent colonizations of former lignite mining areas in Eastern Germany by Epipactis palustris (Orchidaceae) by Esfeld, Korinna, Hensen, I, Wesche, K, Jakob, S. S, Tischew, S, Blattner, F. R

“…Former lignite mining areas in Eastern Germany are valuable secondary habitats for many plant and animal species endangered in the natural landscape. Here, we…”
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Sex-specific SCAR markers in the dioecious plant Rumex nivalis (Polygonaceae) and implications for the evolution of sex chromosomes by STEHLIK, I, BLATTNER, F. R

“…We developed SCAR primers based on isolated and sequenced male-specific fragments as identified in an AFLP analysis of the dioecious plant Rumex nivalis. PCR…”
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Nunatak survival of the high Alpine plant Eritrichium nanum (L.) Gaudin in the central Alps during the ice ages by Stehlik, I., Blattner, F. R., Holderegger, R., Bachmann, K.

“…Polymerase chain reaction–restriction fragment length polymorphisms (PCR‐RFLPs) and sequence analysis of noncoding regions of chloroplast DNA were used to…”
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On differential variability of expression ratios: improving statistical inference about gene expression changes from microarray data by Newton, M A, Kendziorski, C M, Richmond, C S, Blattner, F R, Tsui, K W

“…We consider the problem of inferring fold changes in gene expression from cDNA microarray data. Standard procedures focus on the ratio of measured fluorescent…”
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Storage and mobilization as antagonistic functional constraints on seed storage globulin evolution by Shutov, A. D., Bäumlein, H., Blattner, F. R., Müntz, K.

“…When seeds germinate nearly all the proteins are degraded in senescing storage tissue cells. All these proteins act as amino acid reserves which are mobilized…”
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The Complete Genome Sequence of Escherichia coli K-12 by Blattner, Frederick R., Plunkett, Guy, Bloch, Craig A., Perna, Nicole T., Burland, Valerie, Riley, Monica, Collado-Vides, Julio, Glasner, Jeremy D., Rode, Christopher K., Mayhew, George F., Gregor, Jason, Davis, Nelson Wayne, Kirkpatrick, Heather A., Goeden, Michael A., Rose, Debra J., Mau, Bob, Shao, Ying

“…The 4,639,221-base pair sequence of Escherichia coli K-12 is presented. Of 4288 protein-coding genes annotated, 38 percent have no attributed function…”
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Molecular Evolution of a Pathogenicity Island from Enterohemorrhagic Escherichia coli O157:H7 by PERNA, N. T, MAYHEW, G. F, POSFAI, G, ELLIOTT, S, DONNENBERG, M. S, KAPER, J. B, BLATTNER, F. R

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High-Density Microarray-Mediated Gene Expression Profiling of Escherichia coli by Wei, Y, Lee, J M, Richmond, C, Blattner, F R, Rafalski, J A, LaRossa, R A

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Complete DNA Sequence and Analysis of the Large Virulence Plasmid of Shigella flexneri by VENKATESAN, Malabi M, GOLDBERG, Marcia B, ROSE, Debra J, GROTBECK, Erik J, BURLAND, Valerie, BLATTNER, Frederick R

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A large-conductance mechanosensitive channel in E. coli encoded by mscL alone by Sukharev, Sergei I, Blount, Paul, Martinac, Boris, Blattner, Frederick R, Kung, Ching

“…All cellular organisms respond to vibration, touch, gravity or changes in osmolarity, although the molecules on which such mechanosensations depend are…”
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A Genomic Sample Sequence of the Entomopathogenic Bacterium Photorhabdus luminescens W14: Potential Implications for Virulence by FFRENCH-CONSTANT, R. H, WATERFIELD, N, BURLAND, V, PERNA, N. T, DABORN, P. J, BOWEN, D, BLATTNER, F. R

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Characterization of twenty-six new heat shock genes of Escherichia coli by Chuang, S E, Blattner, F R

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Global regulation of gene expression in Escherichia coli by SHUANG-EN CHUANG, DANIELS, D. L, BLATTNER, F. R

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The complete DNA sequence and analysis of R27, a large IncHI plasmid from Salmonella typhi that is temperature sensitive for transfer by Sherburne, C K, Lawley, T D, Gilmour, M W, Blattner, F R, Burland, V, Grotbeck, E, Rose, D J, Taylor, D E

“…Salmonella typhi, the causative agent of typhoid fever, annually infects 16 million people and kills 600 000 world wide. Plasmid-encoded multiple drug…”
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Versatile insertion plasmids for targeted genome manipulations in bacteria: isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome by Posfai, Gyorgy, Koob, Michael D, Kirkpatrick, Heather A, Blattner, Frederick R

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DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication by Burland, V, Plunkett, 3rd, G, Daniels, D L, Blattner, F R

“…The DNA sequence of a 136-kb segment (81.5 to 84.5 min) from the Escherichia coli origin of replication region has been determined and analyzed. Of the 122…”
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Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome by Pósfai, György, Kolisnychenko, Vitaliy, Bereczki, Zsuzsa, Blattner, Frederick R.

“…A simple and efficient gene replacement method, based on the recombination and repair activities of the cell, was developed. The method permits the targeted…”
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