Search Results - "Bienkowska, J."

Cancer-Associated Fibroblasts in Oral Cancer: A Current Perspective on Function and Potential for Therapeutic Targeting by Bienkowska, Kamila J, Hanley, Christopher J, Thomas, Gareth J

“…The role of the tumour microenvironement (TME) in cancer progression and resistance to therapies is now widely recognized. The most prominent non-immune cell…”
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Serious diabetes-specific emotional problems in patients with type 2 diabetes who have different levels of comorbid depression: A Polish study from the European Depression in Diabetes (EDID) Research Consortium by Kokoszka, A, Pouwer, F, Jodko, A, Radzio, R, Mućko, P, Bieńkowska, J, Kuligowska, E, Smoczyńska, O, Skłodowska, Z

“…Abstract Objective Depression is a common psychiatric problem in patients with type 2 diabetes (DM2). A common view is that the burden of having DM2…”
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Adolescent age estimation using voice features by Bugdol, Marcin D, Bugdol, Monika N, Bieńkowska, Maria J, Lipowicz, Anna, Wijata, Agata M, Mitas, Andrzej W

“…In this paper, a method for evaluating the chronological age of adolescents on the basis of their voice signal is presented. For every examined child, the…”
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Prediction of menarcheal status of girls using voice features by Bugdol, Marcin D., Bugdol, Monika N., Lipowicz, Anna M., Mitas, Andrzej W., Bienkowska, Maria J., Wijata, Agata M.

“…A method for evaluating the menarcheal status of girls on the basis of their voice features is presented in the paper. The registration procedure consists of…”
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Biology's new Rosetta stone by Das, Sudeshna, Yu, Lihua, Gaitatzes, Chrysanthe, Rogers, Robert, Freeman, James, Bienkowska, Jadwiga, Adams, R. Mark, Smith, Temple F, Lindelien, James

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iWRAP: An Interface Threading Approach with Application to Prediction of Cancer-Related Protein–Protein Interactions by Hosur, Raghavendra, Xu, Jinbo, Bienkowska, Jadwiga, Berger, Bonnie

“…Current homology modeling methods for predicting protein–protein interactions (PPIs) have difficulty in the “twilight zone” (< 40%) of sequence identities…”
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Automatic pattern embedding in protein structure models by Bienkowska, J., Hongxian He, Smith, T.F.

“…This article describes an implementation of a set of rules for automatically embedding a minimal functional sequence pattern in a structural hidden Markov…”
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Abstract PD5-08: Neoadjuvant chemotherapy alters the genomic landscape and immune microenvironment of breast cancers by Kan, Z, Lal, S, Ding, Y, Lee, JE, Lee, S-H, Lee, SK, Yu, JH, Choi, Y-l, Kim, SW, Nam, SJ, Kim, J-Y, Ram, S, Powell, E, Ching, K, Cho, SY, Bonato, V, Deng, S, Park, W-Y, Rejto, P, Bienkowska, J, Park, Y-H

“…Understanding how standard-of-care drug treatments affect tumor intrinsic biology and microenvironment is critical for elucidating drug resistance mechanisms…”
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Crystal structure of the anthrax lethal factor by Liddington, Robert C, Pannifer, Andrew D, Wong, Thiang Yian, Schwarzenbacher, Robert, Renatus, Martin, Petosa, Carlo, Bienkowska, Jadwiga, Lacy, D. Borden, Collier, R. John, Park, Sukjoon, Leppla, Stephen H, Hanna, Philip

“…Lethal factor (LF) is a protein (relative molecular mass 90,000) that is critical in the pathogenesis of anthrax. It is a highly specific protease that cleaves…”
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PANP - a New Method of Gene Detection on Oligonucleotide Expression Arrays by Warren, P., Taylor, D., Martini, P.G.V., Jackson, J., Bienkowska, J.

“…The method currently most used for probeset detection calls on Affymetrix GeneChipreg Human Genome Arrays is provided as part of the MAS5 software. The MAS…”
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Convergent random forest predictor: Methodology for predicting drug response from genome-scale data applied to anti-TNF response by Bienkowska, Jadwiga R., Dalgin, Gul S., Batliwalla, Franak, Allaire, Normand, Roubenoff, Ronenn, Gregersen, Peter K., Carulli, John P.

“…Biomarker development for prediction of patient response to therapy is one of the goals of molecular profiling of human tissues. Due to the large number of…”
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Crystal structure of the zeta isoform of the 14-3-3 protein by Liu, Dong, Bienkowska, Jadwiga, Petosa, Carlo, Collier, R. John, Fu, Halan, Liddington, Robert

“…The 14-3-3 family of proteins have recently been identified as regulatory elements in intracellular signalling pathways: 14-3-3 proteins bind to oncogene and…”
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Computational characterization of proteins by Bienkowska, Jadwiga

“…Computational characterization of proteins is a necessary first step in understanding the biologic role of a protein. The composite architecture of mammalian…”
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Light-cone quantization of the Liouville model by Bienkowska, J

“…We present the quantization of the Liouville model defined in light-cone coordinates in (1,1) signature space. We take advantage of the representation of the…”
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The von Willebrand Factor A3 Domain Does Not Contain a Metal Ion-dependent Adhesion Site Motif by Bienkowska, Jadwiga, Cruz, Miguel, Atiemo, Andrew, Handin, Robert, Liddington, Robert

“…von Willebrand factor (vWF) is a multimeric plasma protein that mediates platelet adhesion to exposed subendothelium at sites of vascular injury. The A3 domain…”
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Experimental comparison and cross-validation of Affymetrix HT plate and cartridge array gene expression platforms by Allaire, Normand E., Rieder, Leila E., Bienkowska, Jadwiga, Carulli, John P.

“…The successful use of gene expression microarrays in basic research studies has spawned interest in the use of this technology for clinical trial and…”
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A search method for homologs of small proteins. Ubiquitin‐like proteins in prokaryotic cells? by Bienkowska, Jadwiga R., Hartman, Hyman, Smith, Temple F.

“…The question of protein homology versus analogy arises when proteins share a common function or a common structural fold without any statistically significant…”
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O59: Interactions entre les nanoparticules alimentaires de TiO2, le mucus et les bactéries du microbiote intestinal : approche in vitro by Talbot, P., Radziwill-Bienkowska, J., Steenkeste, K., Cinquin, B., Jamme, F., Robert, V., Cherbuy, C., Chain, F., Rul, F., Champomier-Vergès, M., Réfrégiers, M., Thomas, M., Mercier-Bonin, M.

“…Les nanoparticules de dioxyde de titane (TiO2) sont largement utilisées comme additif alimentaire [1]. Toutefois, leur devenir dans l’intestin reste peu étudié…”
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Transcription Profiles of Rheumatoid Arthritis Patients Reveal Genes Characterizing Different Response to Anti-TNF Therapy by Batliwalla, Franak, Assistant Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Gregersen, Peter, Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Allaire, Normand, Scientist, BiogenIdec, Drug Discovery, Cambridge, NY, Li, Wentian, Assistant Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Perrin, Steve, Associate Director, BiogenIdec, Drug Discovery, Cambridge, MA, Kern, Marlena, Research Associate, Feinstein Institute for Medical Research, Manhasset, NY, Damle, Aarti, Research Associate, Feinstein Institute for Medical Research, Manhasset, NY, Carulli, John, Principal Scientist, BiogenIdec, Drug Discovery, Cambridge, MA, Bienkowska, Jadwiga, Principal Scientist, Biogenidec, Drug Discovery, Cambridge, MA

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Genome-Wide SNP Scan Identifies Polymorphisms Associated with Differential Response to Anti-TNF Treatment Among Rheumatoid Arthritis Patients in the ABCoN Cohort by Carulli, John, Principal Scientist, BiogenIdec, Cambridge, MA, Batliwalla, Franak, Assistant Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Liu, Chunyu, Scientist, BiogenIdec, Drug Discovery, Cambridge, MA, Damle, Aarti, Assistant Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Bienkowska, Jadwiga, Principal Scientist, Biogenidec, Drug Discovery, Cambridge, MA, Lee, Annette, Assistant Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Li, Wentian, Assistant Investigator, Feinstein Institute for Medical Research, Manhasset, NY, Gregersen, Peter, Investigator, Feinstein Institute for Medical Research, Manhasset, NY

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