Search Results - "Berezney, Ronald"

Chromosome territories and the global regulation of the genome by Fritz, Andrew J., Sehgal, Nitasha, Pliss, Artem, Xu, Jinhui, Berezney, Ronald

“…Spatial positioning is a fundamental principle governing nuclear processes. Chromatin is organized as a hierarchy from nucleosomes to Mbp chromatin domains…”
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Preferential induction of apoptotic cell death in melanoma cells as compared with normal keratinocytes using a non-thermal plasma torch by Zucker, Shoshanna N., Zirnheld, Jennifer, Bagati, Archis, DiSanto, Thomas M., Des Soye, Benjamin, Wawrzyniak, Joseph A., Etemadi, Kasra, Nikiforov, Mikhail, Berezney, Ronald

“…Selective induction of apoptosis in melanoma cells is optimal for therapeutic development. To achieve this goal, a non-thermal helium plasma torch was modified…”
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Matrin 3: Chromosomal distribution and protein interactions by Zeitz, Michael J., Malyavantham, Kishore S., Seifert, Brandon, Berezney, Ronald

“…Matrin 3 (matr3), an abundant protein of the internal nuclear matrix, has been linked to a variety of functional events. As a step toward defining its…”
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Cell type specific chromosome territory organization in the interphase nucleus of normal and cancer cells by Marella, Narasimharao V., Bhattacharya, Sambit, Mukherjee, Lopamudra, Xu, Jinhui, Berezney, Ronald

“…Numerous studies indicate that the genome of higher eukaryotes is organized into distinct chromosome territories and that the 3‐D arrangement of these…”
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The Prolyl Isomerase Pin1 Targets Stem-Loop Binding Protein (SLBP) To Dissociate the SLBP-Histone mRNA Complex Linking Histone mRNA Decay with SLBP Ubiquitination by Krishnan, Nithya, Lam, TuKiet T., Fritz, Andrew, Rempinski, Donald, O'Loughlin, Kieran, Minderman, Hans, Berezney, Ronald, Marzluff, William F., Thapar, Roopa

“…Article Usage Stats Services MCB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Cell type specific alterations in interchromosomal networks across the cell cycle by Fritz, Andrew J, Stojkovic, Branislav, Ding, Hu, Xu, Jinhui, Bhattacharya, Sambit, Berezney, Ronald

“…The interchromosomal organization of a subset of human chromosomes (#1, 4, 11, 12, 16, 17, and 18) was examined in G1 and S phase of human WI38 lung fibroblast…”
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The spatio-temporal organization of DNA replication sites is identical in primary, immortalized and transformed mammalian cells by Dimitrova, Daniela S, Berezney, Ronald

“…We investigated the organization of DNA replication sites in primary (young or presenescent), immortalized and transformed mammalian cells. Four different…”
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Cytogenetic and cDNA Microarray Expression Analysis of MCF10 Human Breast Cancer Progression Cell Lines by MARELLA, Narasimharao V, MALYAVANTHAM, Kishore S, JIANMIN WANG, MATSUI, Sei-Ichi, PING LIANG, BEREZNEY, Ronald

“…We used a combination of spectral karyotyping, array comparative genomic hybridization, and cDNA microarrays to gain insights into the structural and…”
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Chromosomal rearrangements during human epidermal keratinocyte differentiation by Marella, Narasimharao V., Seifert, Brandon, Nagarajan, Priyadharsini, Sinha, Satrajit, Berezney, Ronald

“…Undifferentiated human epidermal keratinocytes are self‐renewing stem cells that can be induced to undergo a program of differentiation by varying the calcium…”
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Heterogeneity of eukaryotic replicons, replicon clusters, and replication foci by Berezney, R, Dubey, D D, Huberman, J A

“…According to the current paradigm, replication foci are discrete sites in the interphase nucleus where assemblies of DNA replication enzymes simultaneously…”
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The nuclear matrix: a heuristic model for investigating genomic organization and function in the cell nucleus by Berezney, R

“…Despite significant advances in deciphering the molecular events underlying genomic function, our understanding of these integrated processes inside the…”
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Spatial and Temporal Dynamics of DNA Replication Sites in Mammalian Cells by Ma, Hong, Samarabandu, Jagath, Devdhar, Rekandu S., Acharya, Raj, Cheng, Ping-chin, Meng, Chunling, Berezney, Ronald

“…Fluorescence microscopic analysis of newly replicated DNA has revealed discrete granular sites of replication (RS). The average size and number of replication…”
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Spatio-temporal dynamics of replication and transcription sites in the mammalian cell nucleus by Malyavantham, Kishore S, Bhattacharya, Sambit, Alonso, William D, Acharya, Raj, Berezney, Ronald

“…To study when and where active genes replicated in early S phase are transcribed, a series of pulse-chase experiments are performed to label replicating…”
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Integrative nuclear FGFR1 signaling (INFS) pathway mediates activation of the tyrosine hydroxylase gene by angiotensin II, depolarization and protein kinase C by Peng, Hu, Myers, Jason, Fang, Xiaohong, Stachowiak,,1, Ewa K., Maher, Pamela A., Martins, Gabriel G., Popescu, Gabriela, Berezney‡, Ronald, Stachowiak, Michal K.

“…The integrative nuclear FGFR1 signaling (INFS) pathway functions in association with cellular growth, differentiation, and regulation of gene expression, and…”
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The new paradigm: Integrating genomic function and nuclear architecture by Berezney, Ronald, Wei, Xiangyun

“…A new view of the cell nucleus is emerging based on the functional dynamics of nuclear architecture. The striking structural preservation of a variety of…”
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Growth-related changes in phosphorylation of yeast RNA polymerase II by Patturajan, M, Schulte, R.J, Sefton, B.M, Berezney, R, Vincent, M, Bensaude, O, Warren, S.L, Corden, J.L

“…The largest subunit of RNA polymerase II contains a unique C-terminal domain (CTD) consisting of tandem repeats of the consensus heptapeptide sequence Tyr 1…”
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A Nuclear Matrix Protein Interacts with the Phosphorylated C-Terminal Domain of RNA Polymerase II by Patturajan, Meera, Wei, Xiangyun, Berezney, Ronald, Corden, Jeffry L.

“…Article Usage Stats Services MCB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Matrin CYP, an SR-rich Cyclophilin That Associates with the Nuclear Matrix and Splicing Factors by Mortillaro, M J, Berezney, R

“…We report the identification and cloning of a nuclear matrix protein termed matrin cyclophilin or matrin CYP. The derived sequence of matrin cyp encodes a…”
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Ladder-like amplification of the type I interferon gene cluster in the human osteosarcoma cell line MG63 by Marella, Narasimharao V, Zeitz, Michael J, Malyavantham, Kishore S, Pliss, Artem, Matsui, Sei-ichi, Goetze, Sandra, Bode, Juergen, Raska, Ivan, Berezney, Ronald

“…The organization of the type I interferon (IFN) gene cluster (9p21.3) was studied in a human osteosarcoma cell line (MG63). Array comparative genomic…”
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Wide-scale alterations in interchromosomal organization in breast cancer cells: defining a network of interacting chromosomes by Fritz, Andrew J, Stojkovic, Branislav, Ding, Hu, Xu, Jinhui, Bhattacharya, Sambit, Gaile, Daniel, Berezney, Ronald

“…The interchromosomal spatial positionings of a subset of human chromosomes was examined in the human breast cell line MCF10A (10A) and its malignant…”
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