Search Results - "Benso, Alfredo"

IL6-mediated HCoV-host interactome regulatory network and GO/Pathway enrichment analysis by Politano, Gianfranco, Benso, Alfredo

“…During these days of global emergency for the COVID-19 disease outbreak, there is an urgency to share reliable information able to help worldwide life…”
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Estimation of sickness absenteeism among Italian healthcare workers during seasonal influenza epidemics by Gianino, Maria Michela, Politano, Gianfranco, Scarmozzino, Antonio, Charrier, Lorena, Testa, Marco, Giacomelli, Sebastian, Benso, Alfredo, Zotti, Carla Maria

“…To analyze absenteeism among healthcare workers (HCWs) at a large Italian hospital and to estimate the increase in absenteeism that occurred during seasonal…”
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Editorial: Integrated systems genomic approaches for characterizing uncharacterized proteins by Valadi, Jayaraman, Sundararajan, Vijayaraghava Seshadri, Bandapalli, Obul Reddy, Benso, Alfredo, Suravajhala, Prashanth

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A three-way approach for protein function classification by Ur Rehman, Hafeez, Azam, Nouman, Yao, JingTao, Benso, Alfredo

“…The knowledge of protein functions plays an essential role in understanding biological cells and has a significant impact on human life in areas such as…”
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ReNE: a cytoscape plugin for regulatory network enhancement by Politano, Gianfranco, Benso, Alfredo, Savino, Alessandro, Di Carlo, Stefano

“…One of the biggest challenges in the study of biological regulatory mechanisms is the integration, americanmodeling, and analysis of the complex interactions…”
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Nets-within-nets for modeling emergent patterns in ontogenetic processes by Bardini, Roberta, Benso, Alfredo, Politano, Gianfranco, Di Carlo, Stefano

“…[Display omitted] •To study ontogenesis, it is necessary to consider different levels of regulation, both genetic and epigenetic.•Nets-Within-Nets formalism…”
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CapGAN: Text-to-Image Synthesis Using Capsule GANs by Omar, Maryam, Ur Rehman, Hafeez, Samin, Omar Bin, Alazab, Moutaz, Politano, Gianfranco, Benso, Alfredo

“…Text-to-image synthesis is one of the most critical and challenging problems of generative modeling. It is of substantial importance in the area of automatic…”
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Determinants Associated With the Risk of Emergency Department Visits Among Patients Receiving Integrated Home Care Services: A 6-Year Retrospective Observational Study in a Large Italian Region by Campagna, Sara, Borraccino, Alberto, Politano, Gianfranco, Benso, Alfredo, Dalmasso, Marco, Dimonte, Valerio, Gianino, Maria Michela

“…Allowing patients to remain at home and decreasing the number of unnecessary emergency room visits have become important policy goals in modern healthcare…”
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Identification of miRNAs Potentially Involved in Bronchiolitis Obliterans Syndrome: A Computational Study by Di Carlo, Stefano, Rossi, Elena, Politano, Gianfranco, Inghilleri, Simona, Morbini, Patrizia, Calabrese, Fiorella, Benso, Alfredo, Savino, Alessandro, Cova, Emanuela, Zampieri, Davide, Meloni, Federica

“…The pathogenesis of Bronchiolitis Obliterans Syndrome (BOS), the main clinical phenotype of chronic lung allograft dysfunction, is poorly understood. Recent…”
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Application of Microsatellites to Trace the Dairy Products Back to the Farm of Origin by Perga, Simona, Biolatti, Cristina, Martini, Isabella, Rossi, Francesco, Benso, Alfredo, Acutis, Pier Luigi, Bagnato, Alessandro, Cognata, Domenico, Caroggio, Piero, Peletto, Simone, Modesto, Paola

“…The increasing number of food frauds, mainly targeting high quality products, is a rising concern among producers and authorities appointed to food controls…”
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A Graph Based Framework to Model Virus Integration Sites by Fronza, Raffaele, Vasciaveo, Alessandro, Benso, Alfredo, Schmidt, Manfred

“…With next generation sequencing thousands of virus and viral vector integration genome targets are now under investigation to uncover specific integration…”
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Building gene expression profile classifiers with a simple and efficient rejection option in R by Benso, Alfredo, Di Carlo, Stefano, Politano, Gianfranco, Savino, Alessandro, Hafeezurrehman, Hafeez

“…The collection of gene expression profiles from DNA microarrays and their analysis with pattern recognition algorithms is a powerful technology applied to…”
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Alice in "Bio-Land": Engineering Challenges in the World of Life Sciences by Benso, Alfredo, Di Carlo, Stefano, Politano, Gianfranco, Savino, Alessandro, Bucci, Enrico

“…Alice is an engineer who ventures into the research world of life sciences. To her eyes, life sciences researchers work backwards compared to what happens in…”
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FunMod: A Cytoscape Plugin for Identifying Functional Modules in Undirected Protein–Protein Networks by Natale, Massimo, Benso, Alfredo, Di Carlo, Stefano, Ficarra, Elisa

“…The characterization of the interacting behaviors of complex biological systems is a primary objective in protein–protein network analysis and computational…”
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The integration of clinical data in the assessment of multiple sclerosis – A review by Ostellino, Sofia, Benso, Alfredo, Politano, Gianfranco

“…•Multiple Sclerosis (MS) progression needs to be monitored through heterogeneous clinical measures.•Cognitive assessment via neuropsychological tests (NP) is…”
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Augmented Reading: The Present and Future of Electronic Scientific Publications by Montuschi, Paolo, Benso, Alfredo

“…As technological, economic, and social factors drive scientific publishing toward electronic formats, opportunities open beyond traditional reading and writing…”
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Prioritizing single-nucleotide polymorphisms and variants associated with clinical mastitis by Suravajhala, Prashanth, Benso, Alfredo

“…Next-generation sequencing technology has provided resources to easily explore and identify candidate single-nucleotide polymorphisms (SNPs) and variants…”
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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens by Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R, Lee, Alexandra J, Kacsoh, Balint Z, Crocker, Alex W, Lewis, Kimberley A, Georghiou, George, Nguyen, Huy N, Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S, Dalkıran, Alperen, Cetin Atalay, Rengul, Zhang, Chengxin, Hurto, Rebecca L, Freddolino, Peter L, Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernández, José M, Gemovic, Branislava, Perovic, Vladimir R, Davidović, Radoslav S, Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad R K, Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C, Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A, Antczak, Magdalena, Fabris, Fabio, Wass, Mark N, Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E, Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J, Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W, Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T, Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Warwick Vesztrocy, Alex, Rodriguez, Jose Manuel, Tress, Michael L, Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B, Reeb, Jonas, Ritchie, David W, Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijević, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico

“…The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global, community-driven effort to evaluate and improve the computational annotation of…”
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An expanded evaluation of protein function prediction methods shows an improvement in accuracy by Jiang, Yuxiang, Oron, Tal Ronnen, Clark, Wyatt T, Bankapur, Asma R, D'Andrea, Daniel, Lepore, Rosalba, Funk, Christopher S, Kahanda, Indika, Verspoor, Karin M, Ben-Hur, Asa, Koo, Da Chen Emily, Penfold-Brown, Duncan, Shasha, Dennis, Youngs, Noah, Bonneau, Richard, Lin, Alexandra, Sahraeian, Sayed M E, Martelli, Pier Luigi, Profiti, Giuseppe, Casadio, Rita, Cao, Renzhi, Zhong, Zhaolong, Cheng, Jianlin, Altenhoff, Adrian, Skunca, Nives, Dessimoz, Christophe, Dogan, Tunca, Hakala, Kai, Kaewphan, Suwisa, Mehryary, Farrokh, Salakoski, Tapio, Ginter, Filip, Fang, Hai, Smithers, Ben, Oates, Matt, Gough, Julian, Törönen, Petri, Koskinen, Patrik, Holm, Liisa, Chen, Ching-Tai, Hsu, Wen-Lian, Bryson, Kevin, Cozzetto, Domenico, Minneci, Federico, Jones, David T, Chapman, Samuel, Bkc, Dukka, Khan, Ishita K, Kihara, Daisuke, Ofer, Dan, Rappoport, Nadav, Stern, Amos, Cibrian-Uhalte, Elena, Denny, Paul, Foulger, Rebecca E, Hieta, Reija, Legge, Duncan, Lovering, Ruth C, Magrane, Michele, Melidoni, Anna N, Mutowo-Meullenet, Prudence, Pichler, Klemens, Shypitsyna, Aleksandra, Li, Biao, Zakeri, Pooya, ElShal, Sarah, Tranchevent, Léon-Charles, Das, Sayoni, Dawson, Natalie L, Lee, David, Lees, Jonathan G, Sillitoe, Ian, Bhat, Prajwal, Nepusz, Tamás, Romero, Alfonso E, Sasidharan, Rajkumar, Yang, Haixuan, Paccanaro, Alberto, Gillis, Jesse, Sedeño-Cortés, Adriana E, Pavlidis, Paul, Feng, Shou, Cejuela, Juan M, Goldberg, Tatyana, Hamp, Tobias, Richter, Lothar, Salamov, Asaf, Gabaldon, Toni, Marcet-Houben, Marina, Supek, Fran, Gong, Qingtian, Ning, Wei, Zhou, Yuanpeng, Tian, Weidong, Falda, Marco, Fontana, Paolo, Lavezzo, Enrico, Toppo, Stefano, Ferrari, Carlo, Giollo, Manuel

“…A major bottleneck in our understanding of the molecular underpinnings of life is the assignment of function to proteins. While molecular experiments provide…”
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PRONTO-TK: a user-friendly PROtein Neural neTwOrk tool-kit for accessible protein function prediction by Politano, Gianfranco, Benso, Alfredo, Rehman, Hafeez Ur, Re, Angela

“…Abstract Associating one or more Gene Ontology (GO) terms to a protein means making a statement about a particular functional characteristic of the protein…”
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