Search Results - "Ben Zakour, Nouri"
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BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
Published in BMC genomics (08-08-2011)“…Visualisation of genome comparisons is invaluable for helping to determine genotypic differences between closely related prokaryotes. New visualisation and…”
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Global dissemination of a multidrug resistant Escherichia coli clone
Published in Proceedings of the National Academy of Sciences - PNAS (15-04-2014)“…Escherichia coli sequence type 131 (ST131) is a globally disseminated, multidrug resistant (MDR) clone responsible for a high proportion of urinary tract and…”
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3
Safety of bacteriophage therapy in severe Staphylococcus aureus infection
Published in Nature microbiology (01-03-2020)“…In this single-arm non-comparative trial, 13 patients in an Australian hospital with severe Staphylococcus aureus infections were intravenously administered a…”
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Host adaptation and convergent evolution increases antibiotic resistance without loss of virulence in a major human pathogen
Published in PLoS pathogens (01-03-2019)“…As human population density and antibiotic exposure increase, specialised bacterial subtypes have begun to emerge. Arising among species that are common…”
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Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus
Published in Proceedings of the National Academy of Sciences - PNAS (17-11-2009)“…The impact of globalization on the emergence and spread of pathogens is an important veterinary and public health issue. Staphylococcus aureus is a notorious…”
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The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone
Published in PloS one (15-08-2014)“…Escherichia coli ST131 is now recognised as a leading contributor to urinary tract and bloodstream infections in both community and clinical settings. Here we…”
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Bacteriophage Therapy of Ventilator-associated Pneumonia and Empyema Caused by Pseudomonas aeruginosa
Published in American journal of respiratory and critical care medicine (01-11-2019)“…The case study of a 77-year-old woman who underwent a right posterolateral mini-thoracotomy for resection of a right lower lobe adenocarcinoma with mediastinal…”
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Integrating multiple genomic technologies to investigate an outbreak of carbapenemase-producing Enterobacter hormaechei
Published in Nature communications (24-01-2020)“…Carbapenem-resistant Enterobacteriaceae (CRE) represent an urgent threat to human health. Here we report the application of several complementary whole-genome…”
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Hospital-wide Eradication of a Nosocomial Legionella pneumophila Serogroup 1 Outbreak
Published in Clinical infectious diseases (01-02-2016)“…Background. Two proven nosocomial cases of Legionella pneumonia occurred at the Wesley Hospital (Brisbane, Australia) in May 2013. To trace the epidemiology of…”
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Molecular characterization of a multidrug resistance IncF plasmid from the globally disseminated Escherichia coli ST131 clone
Published in PloS one (15-04-2015)“…Escherichia coli sequence type 131 (E. coli ST131) is a recently emerged and globally disseminated multidrug resistant clone associated with urinary tract and…”
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Within-host whole genome analysis of an antibiotic resistant Pseudomonas aeruginosa strain sub-type in cystic fibrosis
Published in PloS one (08-03-2017)“…A Pseudomonas aeruginosa AUST-02 strain sub-type (M3L7) has been identified in Australia, infects the lungs of some people with cystic fibrosis and is…”
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Sequential Acquisition of Virulence and Fluoroquinolone Resistance Has Shaped the Evolution of Escherichia coli ST131
Published in mBio (26-04-2016)“…Escherichia coli ST131 is the most frequently isolated fluoroquinolone-resistant (FQR) E. coli clone worldwide and a major cause of urinary tract and…”
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Evolution of the pheV-tRNA integrated genomic island in Escherichia coli
Published in PLoS genetics (24-10-2024)“…Escherichia coli exhibit extensive genetic diversity at the genome level, particularly within their accessory genome. The tRNA integrated genomic islands…”
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14
Staphylococcus aureus Virulence Expression Is Impaired by Lactococcus lactis in Mixed Cultures
Published in Applied and Environmental Microbiology (01-07-2009)“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Correction: Within-host whole genome analysis of an antibiotic resistant Pseudomonas aeruginosa strain sub-type in cystic fibrosis
Published in PloS one (14-01-2019)“…[This corrects the article DOI: 10.1371/journal.pone.0172179.]…”
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Complete Genome Sequence of the Canine Pathogen Staphylococcus pseudintermedius
Published in Journal of Bacteriology (01-05-2011)“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Whole genome analysis of cephalosporin-resistant Escherichia coli from bloodstream infections in Australia, New Zealand and Singapore: high prevalence of CMY-2 producers and ST131 carrying blaCTX-M-15 and blaCTX-M-27
Published in Journal of antimicrobial chemotherapy (01-03-2018)“…To characterize MDR Escherichia coli from bloodstream infections (BSIs) in Australia, New Zealand and Singapore. We collected third-generation…”
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Polyclonal Staphylococcus aureus Bacteremia
Published in Annals of internal medicine (17-12-2019)“…Polyclonal, coagulase-negative staphylococci are common contaminants of blood cultures (1), but polyclonal, coagulase-positive staphylococci (Staphylococcus…”
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Tracing the evolutionary history of the pandemic group A streptococcal M1T1 clone
Published in The FASEB journal (01-11-2012)“…The past 50 years has witnessed the emergence of new viral and bacterial pathogens with global effect on human health. The hyperinvasive group A Streptococcus…”
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Tandem repeat sequence analysis of staphylococcal protein A ( spa) gene in methicillin-resistant Staphylococcus pseudintermedius
Published in Veterinary microbiology (30-03-2009)“…A putative staphylococcal protein A ( spa) gene was discovered in the genome of Staphylococcus pseudintermedius and used for developing a species-specific spa…”
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