Search Results - "Beka, Lidia"

Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing by Goldstein, Sarah, Beka, Lidia, Graf, Joerg, Klassen, Jonathan L

“…Short-read sequencing technologies have made microbial genome sequencing cheap and accessible. However, closing genomes is often costly and assembling short…”
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Hypermutator strains of Pseudomonas aeruginosa reveal novel pathways of resistance to combinations of cephalosporin antibiotics and beta-lactamase inhibitors by Dulanto Chiang, Augusto, Patil, Prashant P, Beka, Lidia, Youn, Jung-Ho, Launay, Adrien, Bonomo, Robert A, Khil, Pavel P, Dekker, John P

“…Hypermutation due to DNA mismatch repair (MMR) deficiencies can accelerate the development of antibiotic resistance in Pseudomonas aeruginosa. Whether…”
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Host Matters: Medicinal Leech Digestive-Tract Symbionts and Their Pathogenic Potential by Marden, Jeremiah N, McClure, Emily A, Beka, Lidia, Graf, Joerg

“…Digestive-tract microbiota exert tremendous influence over host health. Host-symbiont model systems are studied to investigate how symbioses are initiated and…”
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Low-Level Antimicrobials in the Medicinal Leech Select for Resistant Pathogens That Spread to Patients by Beka, Lidia, Fullmer, Matthew S, Colston, Sophie M, Nelson, Michael C, Talagrand-Reboul, Emilie, Walker, Paul, Ford, Bradley, Whitaker, Iain S, Lamy, Brigitte, Gogarten, Johann Peter, Graf, Joerg

“…Fluoroquinolones (FQs) and ciprofloxacin (Cp) are important antimicrobials that pollute the environment in trace amounts. Although Cp has been recommended as…”
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Bioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test case by Colston, Sophie M, Fullmer, Matthew S, Beka, Lidia, Lamy, Brigitte, Gogarten, J Peter, Graf, Joerg

“…Prokaryotic taxonomy is the underpinning of microbiology, as it provides a framework for the proper identification and naming of organisms. The "gold standard"…”
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Detecting Flavobacterial Fish Pathogens in the Environment via High-Throughput Community Analysis by Testerman, Todd, Beka, Lidia, McClure, Emily Ann, Reichley, Stephen R, King, Stacy, Welch, Timothy J, Graf, Joerg

“…Diseases caused by the fish pathogens Flavobacterium columnare and Flavobacterium psychrophilum are major contributors of preventable losses in the aquaculture…”
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A large-scale, multi-year microbial community survey of a freshwater trout aquaculture facility by Testerman, Todd, Beka, Lidia, Reichley, Stephen R, King, Stacy, Welch, Timothy J, Wiens, Gregory D, Graf, Joerg

“…Abstract Aquaculture is an important tool for solving the growing worldwide food demand, but infectious diseases of farmed animals represent a serious…”
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Draft Genome Sequence of Pedobacter sp. Strain Hv1, an Isolate from Medicinal Leech Mucosal Castings by Ott, Brittany M, Beka, Lidia, Graf, Joerg, Rio, Rita V M

“…The Pedobacter sp. Hv1 strain was isolated from the medicinal leech, Hirudo verbana, mucosal castings. These mucosal sheds have been demonstrated to play a…”
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Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using italic toggle="yes">Aeromonas /italic> as a Test Case by Sophie M. Colston, Matthew S. Fullmer, Lidia Beka, Brigitte Lamy, J. Peter Gogarten, Joerg Graf

“…ABSTRACT Prokaryotic taxonomy is the underpinning of microbiology, as it provides a framework for the proper identification and naming of organisms. The “gold…”
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