Search Results - "Batto, Jean Michel"

Alterations of the human gut microbiome in liver cirrhosis by Qin, Nan, Yang, Fengling, Li, Ang, Prifti, Edi, Chen, Yanfei, Shao, Li, Guo, Jing, Le Chatelier, Emmanuelle, Yao, Jian, Wu, Lingjiao, Zhou, Jiawei, Ni, Shujun, Liu, Lin, Pons, Nicolas, Batto, Jean Michel, Kennedy, Sean P., Leonard, Pierre, Yuan, Chunhui, Ding, Wenchao, Chen, Yuanting, Hu, Xinjun, Zheng, Beiwen, Qian, Guirong, Xu, Wei, Ehrlich, S. Dusko, Zheng, Shusen, Li, Lanjuan

“…Liver cirrhosis occurs as a consequence of many chronic liver diseases that are prevalent worldwide. Here we characterize the gut microbiome in liver cirrhosis…”
Get full text

Prediction of the intestinal resistome by a three-dimensional structure-based method by Ruppé, Etienne, Ghozlane, Amine, Tap, Julien, Pons, Nicolas, Alvarez, Anne-Sophie, Maziers, Nicolas, Cuesta, Trinidad, Hernando-Amado, Sara, Clares, Irene, Martínez, Jose Luís, Coque, Teresa M., Baquero, Fernando, Lanza, Val F., Máiz, Luis, Goulenok, Tiphaine, de Lastours, Victoire, Amor, Nawal, Fantin, Bruno, Wieder, Ingrid, Andremont, Antoine, van Schaik, Willem, Rogers, Malbert, Zhang, Xinglin, Willems, Rob J. L., de Brevern, Alexandre G., Batto, Jean-Michel, Blottière, Hervé M., Léonard, Pierre, Léjard, Véronique, Letur, Aline, Levenez, Florence, Weiszer, Kevin, Haimet, Florence, Doré, Joël, Kennedy, Sean P., Ehrlich, S. Dusko

“…The intestinal microbiota is considered to be a major reservoir of antibiotic resistance determinants (ARDs) that could potentially be transferred to bacterial…”
Get full text

Elevated serum ceramides are linked with obesity-associated gut dysbiosis and impaired glucose metabolism by Kayser, Brandon D., Prifti, Edi, Lhomme, Marie, Belda, Eugeni, Dao, Maria-Carlota, Aron-Wisnewsky, Judith, Kontush, Anatol, Zucker, Jean-Daniel, Rizkalla, Salwa W., Dugail, Isabelle, Clément, Karine

“…Introduction Low gut microbiome richness is associated with dyslipidemia and insulin resistance, and ceramides and other sphingolipids are implicated in the…”
Get full text

Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products by Almeida, Mathieu, Hébert, Agnès, Abraham, Anne-Laure, Rasmussen, Simon, Monnet, Christophe, Pons, Nicolas, Delbès, Céline, Loux, Valentin, Batto, Jean-Michel, Leonard, Pierre, Kennedy, Sean, Ehrlich, Stanislas Dusko, Pop, Mihai, Montel, Marie-Christine, Irlinger, Françoise, Renault, Pierre

“…Microbial communities of traditional cheeses are complex and insufficiently characterized. The origin, safety and functional role in cheese making of these…”
Get full text

Genome Sequence of Taylorella equigenitalis MCE9, the Causative Agent of Contagious Equine Metritis by Hébert, Laurent, Moumen, Bouziane, Duquesne, Fabien, Breuil, Marie-France, Laugier, Claire, Batto, Jean-Michel, Renault, Pierre, Petry, Sandrine

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
Get full text

Genomic characterization of the Taylorella genus by Hébert, Laurent, Moumen, Bouziane, Pons, Nicolas, Duquesne, Fabien, Breuil, Marie-France, Goux, Didier, Batto, Jean-Michel, Laugier, Claire, Renault, Pierre, Petry, Sandrine

“…The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related…”
Get full text

Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus: a chronicle of evolution in action by El Kafsi, Hela, Binesse, Johan, Loux, Valentin, Buratti, Julien, Boudebbouze, Samira, Dervyn, Rozenn, Kennedy, Sean, Galleron, Nathalie, Quinquis, Benoît, Batto, Jean-Michel, Moumen, Bouziane, Maguin, Emmanuelle, van de Guchte, Maarten

“…Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus are lactic acid producing bacteria that are largely used in dairy industries, notably in…”
Get full text

Quality control of microbiota metagenomics by k-mer analysis by Plaza Onate, Florian, Batto, Jean-Michel, Juste, Catherine, Fadlallah, Jehane, Fougeroux, Cyrielle, Gouas, Doriane, Pons, Nicolas, Kennedy, Sean, Levenez, Florence, Dore, Joel, Ehrlich, S Dusko, Gorochov, Guy, Larsen, Martin

“…The biological and clinical consequences of the tight interactions between host and microbiota are rapidly being unraveled by next generation sequencing…”
Get full text

Development of software facilities to characterize regulatory binding motifs and application to streptococcaceae by Pons, Nicolas, Batto, Jean-Michel, Ehrlich, Stanislav Dusko, Renault, Pierre

“…Gene expression regulation often involves the recognition of particular DNA or RNA sequences, called motifs. Detection and characterization of such motifs…”
Get more information

Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology by Dao, Maria Carlota, Everard, Amandine, Aron-Wisnewsky, Judith, Sokolovska, Nataliya, Prifti, Edi, Verger, Eric O, Kayser, Brandon D, Levenez, Florence, Chilloux, Julien, Hoyles, Lesley, Dumas, Marc-Emmanuel, Rizkalla, Salwa W, Doré, Joel, Cani, Patrice D, Clément, Karine

“…Individuals with obesity and type 2 diabetes differ from lean and healthy individuals in their abundance of certain gut microbial species and microbial gene…”
Get more information

A metagenome-wide association study of gut microbiota in type 2 diabetes by Qin, Junjie, Li, Yingrui, Cai, Zhiming, Li, Shenghui, Zhu, Jianfeng, Zhang, Fan, Liang, Suisha, Zhang, Wenwei, Guan, Yuanlin, Shen, Dongqian, Peng, Yangqing, Zhang, Dongya, Jie, Zhuye, Wu, Wenxian, Qin, Youwen, Xue, Wenbin, Li, Junhua, Han, Lingchuan, Lu, Donghui, Wu, Peixian, Dai, Yali, Sun, Xiaojuan, Li, Zesong, Tang, Aifa, Zhong, Shilong, Li, Xiaoping, Chen, Weineng, Xu, Ran, Wang, Mingbang, Feng, Qiang, Gong, Meihua, Yu, Jing, Zhang, Yanyan, Zhang, Ming, Hansen, Torben, Sanchez, Gaston, Raes, Jeroen, Falony, Gwen, Okuda, Shujiro, Almeida, Mathieu, LeChatelier, Emmanuelle, Renault, Pierre, Pons, Nicolas, Batto, Jean-Michel, Zhang, Zhaoxi, Chen, Hua, Yang, Ruifu, Zheng, Weimou, Li, Songgang, Yang, Huanming, Wang, Jian, Ehrlich, S. Dusko, Nielsen, Rasmus, Pedersen, Oluf, Kristiansen, Karsten, Wang, Jun

“…Assessment and characterization of gut microbiota has become a major research area in human disease, including type 2 diabetes, the most prevalent endocrine…”
Get full text

Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota by Forslund, Kristoffer, Hildebrand, Falk, Nielsen, Trine, Falony, Gwen, Le Chatelier, Emmanuelle, Sunagawa, Shinichi, Prifti, Edi, Vieira-Silva, Sara, Gudmundsdottir, Valborg, Krogh Pedersen, Helle, Arumugam, Manimozhiyan, Kristiansen, Karsten, Yvonne Voigt, Anita, Vestergaard, Henrik, Hercog, Rajna, Igor Costea, Paul, Roat Kultima, Jens, Li, Junhua, Jørgensen, Torben, Levenez, Florence, Dore, Joël, Bjørn Nielsen, H., Brunak, Søren, Raes, Jeroen, Hansen, Torben, Wang, Jun, Dusko Ehrlich, S., Bork, Peer, Pedersen, Oluf

“…Growing evidence from metagenome-wide association studies link multiple common disorders to microbial dysbiosis but effects of drug treatment are often not…”
Get full text

complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution by Guchte, M. van de, Penaud, S, Grimaldi, C, Barbe, V, Bryson, K, Nicolas, P, Robert, C, Oztas, S, Mangenot, S, Couloux, A

“…Lactobacillus delbrueckii ssp. bulgaricus (L. bulgaricus) is a representative of the group of lactic acid-producing bacteria, mainly known for its worldwide…”
Get full text

A Data Integration Multi-Omics Approach to Study Calorie Restriction-Induced Changes in Insulin Sensitivity by Dao, Maria Carlota, Sokolovska, Nataliya, Brazeilles, Rémi, Affeldt, Séverine, Pelloux, Véronique, Prifti, Edi, Chilloux, Julien, Verger, Eric O, Kayser, Brandon D, Aron-Wisnewsky, Judith, Ichou, Farid, Pujos-Guillot, Estelle, Hoyles, Lesley, Juste, Catherine, Doré, Joël, Dumas, Marc-Emmanuel, Rizkalla, Salwa W, Holmes, Bridget A, Zucker, Jean-Daniel, Clément, Karine

“…The mechanisms responsible for calorie restriction (CR)-induced improvement in insulin sensitivity (IS) have not been fully elucidated. Greater insight can be…”
Get full text

Enterotypes of the human gut microbiome

Get full text

Elevated serum ceramides are linked with obesity-associated gut dysbiosis and impaired glucose metabolism by Kayser, Brandon, Prifti, Edi, Lhomme, Marie, Belda, Eugeni, Dao, Maria-Carlota, Aron-Wisnewsky, Judith, Cotillard, Aurélie, Kennedy, Sean, Pons, Nicolas, Le Chatelier, Emmanuelle, Almeida, Mathieu, Quinquis, Benoit, Galleron, Nathalie, Batto, Jean-Michel, Renault, Pierre, Ehrlich, Stanislav Dusko, Blottière, Hervé, Leclerc, Marion, de Wouters, Tomas, Lepage, Patricia, Doré, Joel, Kontush, Anatol, Zucker, Jean-Daniel, Rizkalla, Salwa, Dugail, Isabelle, Clément, Karine

Get full text

Transcriptional interactions suggest niche segregation among microorganisms in the human gut by Plichta, Damian Rafal, Juncker, Agnieszka Sierakowska, Bertalan, Marcelo, Rettedal, Elizabeth, Gautier, Laurent, Varela, Encarna, Manichanh, Chaysavanh, Fouqueray, Charlène, Levenez, Florence, Nielsen, Trine, Doré, Joël, Machado, Ana Manuel Dantas, de Evgrafov, Mari Cristina Rodriguez, Hansen, Torben, Jørgensen, Torben, Bork, Peer, Guarner, Francisco, Pedersen, Oluf, Sommer, Morten O. A., Ehrlich, S. Dusko, Sicheritz-Pontén, Thomas, Brunak, Søren, Nielsen, H. Bjørn

“…The human gastrointestinal (GI) tract is the habitat for hundreds of microbial species, of which many cannot be cultivated readily, presumably because of the…”
Get full text

Correction: Corrigendum: Dietary intervention impact on gut microbial gene richness by Cotillard, Aurélie, Kennedy, Sean P., Kong, Ling Chun, Prifti, Edi, Pons, Nicolas, Le Chatelier, Emmanuelle, Almeida, Mathieu, Quinquis, Benoit, Levenez, Florence, Galleron, Nathalie, Gougis, Sophie, Rizkalla, Salwa, Batto, Jean-Michel, Renault, Pierre, consortium, ANR MicroObes, Doré, Joel, Zucker, Jean-Daniel, Clément, Karine, Ehrlich, Stanislav Dusko

“…Nature 500, 585–588 (2013); doi:10.1038/nature12480 In Fig. 2 of this Letter, the units for hsCRP were incorrectly labelled as mg dl−1 instead of mg l−1. We…”
Get full text

Erratum: Corrigendum: Dietary intervention impact on gut microbial gene richness by Cotillard, Aurélie, Kennedy, Sean P., Kong, Ling Chun, Prifti, Edi, Pons, Nicolas, Le Chatelier, Emmanuelle, Almeida, Mathieu, Quinquis, Benoit, Levenez, Florence, Galleron, Nathalie, Gougis, Sophie, Rizkalla, Salwa, Batto, Jean-Michel, Renault, Pierre, consortium, ANR MicroObes, Doré, Joel, Zucker, Jean-Daniel, Clément, Karine, Ehrlich, Stanislav Dusko

Get full text

Addendum: Enterotypes of the human gut microbiome by Arumugam, Manimozhiyan, Raes, Jeroen, Pelletier, Eric, Le Paslier, Denis, Yamada, Takuji, Mende, Daniel R., Fernandes, Gabriel R., Tap, Julien, Bruls, Thomas, Batto, Jean-Michel, Bertalan, Marcelo, Borruel, Natalia, Casellas, Francesc, Fernandez, Leyden, Gautier, Laurent, Hansen, Torben, Hattori, Masahira, Hayashi, Tetsuya, Kleerebezem, Michiel, Kurokawa, Ken, Leclerc, Marion, Levenez, Florence, Manichanh, Chaysavanh, Nielsen, H. Bjørn, Nielsen, Trine, Pons, Nicolas, Poulain, Julie, Qin, Junjie, Sicheritz-Ponten, Thomas, Tims, Sebastian, Torrents, David, Ugarte, Edgardo, Zoetendal, Erwin G., Wang, Jun, Guarner, Francisco, Pedersen, Oluf, de Vos, Willem M., Brunak, Søren, Doré, Joel, Consortium, MetaHIT, Weissenbach, Jean, Ehrlich, S. Dusko, Bork, Peer

Get full text