Search Results - "Basermann, Achim"

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    Appropriate relaxation of non-pharmaceutical interventions minimizes the risk of a resurgence in SARS-CoV-2 infections in spite of the Delta variant by Koslow, Wadim, Kühn, Martin J, Binder, Sebastian, Klitz, Margrit, Abele, Daniel, Basermann, Achim, Meyer-Hermann, Michael

    Published in PLoS computational biology (01-05-2022)
    “…We analyze the relaxation of non-pharmaceutical interventions (NPIs) under an increasing number of vaccinations in Germany. For the spread of SARS-CoV-2 we…”
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    Journal Article
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    SIMD vectorization for simultaneous solution of locally varying linear systems with multiple right-hand sides by Kühn, Martin J., Holke, Johannes, Lutz, Annette, Thies, Jonas, Röhrig-Zöllner, Melven, Bleh, Alexander, Backhaus, Jan, Basermann, Achim

    Published in The Journal of supercomputing (01-09-2023)
    “…Developments in numerical simulation of flows and high-performance computing influence one another. More detailed simulation methods create a permanent need…”
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    Journal Article
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    Regional opening strategies with commuter testing and containment of new SARS-CoV-2 variants in Germany by Kühn, Martin J, Abele, Daniel, Binder, Sebastian, Rack, Kathrin, Klitz, Margrit, Kleinert, Jan, Gilg, Jonas, Spataro, Luca, Koslow, Wadim, Siggel, Martin, Meyer-Hermann, Michael, Basermann, Achim

    Published in BMC infectious diseases (04-04-2022)
    “…Despite the vaccination process in Germany, a large share of the population is still susceptible to SARS-CoV-2. In addition, we face the spread of novel…”
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    Journal Article
  4. 4

    RNA contact prediction by data efficient deep learning by Taubert, Oskar, von der Lehr, Fabrice, Bazarova, Alina, Faber, Christian, Knechtges, Philipp, Weiel, Marie, Debus, Charlotte, Coquelin, Daniel, Basermann, Achim, Streit, Achim, Kesselheim, Stefan, Götz, Markus, Schug, Alexander

    Published in Communications biology (06-09-2023)
    “…On the path to full understanding of the structure-function relationship or even design of RNA, structure prediction would offer an intriguing complement to…”
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    Journal Article
  5. 5

    Agile Earth Observation Satellite Scheduling With a Quantum Annealer by Stollenwerk, Tobias, Michaud, Vincent, Lobe, Elisabeth, Picard, Mathieu, Basermann, Achim, Botter, Thierry

    “…We present a comparison study of state-of-the-art classical optimization methods to a D-Wave 2000Q quantum annealer for the scheduling of agile Earth…”
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    Journal Article
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    Sparse Matrix-vector Multiplication on GPGPU Clusters: A New Storage Format and a Scalable Implementation by Kreutzer, M., Hager, G., Wellein, G., Fehske, H., Basermann, A., Bishop, A. R.

    “…Sparse matrix-vector multiplication (spMVM) is the dominant operation in many sparse solvers. We investigate performance properties of spMVM with matrices of…”
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    Conference Proceeding
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    GHOST: Building Blocks for High Performance Sparse Linear Algebra on Heterogeneous Systems by Kreutzer, Moritz, Thies, Jonas, Röhrig-Zöllner, Melven, Pieper, Andreas, Shahzad, Faisal, Galgon, Martin, Basermann, Achim, Fehske, Holger, Hager, Georg, Wellein, Gerhard

    “…While many of the architectural details of future exascale-class high performance computer systems are still a matter of intense research, there appears to be…”
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    Journal Article
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    On the parallel iterative solution of linear systems arising in the FEAST algorithm for computing inner eigenvalues by Galgon, Martin, Krämer, Lukas, Thies, Jonas, Basermann, Achim, Lang, Bruno

    Published in Parallel computing (01-11-2015)
    “…•Parallel iterative solution of linear systems from FEAST algorithm.•Hybrid parallel implementation.•CG variant with multi-coloring approach for better…”
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    Journal Article
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    Performance of linear solvers in tensor-train format on current multicore architectures by Röhrig-Zöllner, Melven, Becklas, Manuel Joey, Thies, Jonas, Basermann, Achim

    Published 13-12-2023
    “…Tensor networks are a class of algorithms aimed at reducing the computational complexity of high-dimensional problems. They are used in an increasing number of…”
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    Journal Article
  14. 14

    Performance of the low-rank tensor-train SVD (TT-SVD) for large dense tensors on modern multi-core CPUs by Röhrig-Zöllner, Melven, Thies, Jonas, Basermann, Achim

    Published 02-03-2022
    “…There are several factorizations of multi-dimensional tensors into lower-dimensional components, known as `tensor networks'. We consider the popular…”
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    Journal Article
  15. 15

    (R)SE challenges in HPC by Thies, Jonas, Röhrig-Zöllner, Melven, Basermann, Achim

    Published 10-12-2021
    “…We discuss some specific software engineering challenges in the field of high-performance computing, and argue that the slow adoption of SE tools and…”
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    Journal Article
  16. 16

    Agent-based modeling for realistic reproduction of human mobility and contact behavior to evaluate test and isolation strategies in epidemic infectious disease spread by Kerkmann, David, Korf, Sascha, Nguyen, Khoa, Abele, Daniel, Schengen, Alain, Gerstein, Carlotta, Göbbert, Jens Henrik, Basermann, Achim, Kühn, Martin J, Meyer-Hermann, Michael

    Published 10-10-2024
    “…Agent-based models have proven to be useful tools in supporting decision-making processes in different application domains. The advent of modern computers and…”
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    Journal Article
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    High-performance computing of ^sub l/[radical] x i and exp(± x i)^ for a vector of inputs x^sub i^ on Alpha and IA-64 CPUs by Sharif, Haidar, Basermann, Achim, Seidel, Christian, Hunger, Axel

    Published in Journal of systems architecture (01-07-2008)
    “…The modern microprocessors have become more sophisticated, the performance of software on modern architectures has grown more and more difficult to dissect and…”
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    Journal Article
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    Quantum Software Ecosystem Design by Basermann, Achim, Epping, Michael, Fauseweh, Benedikt, Felderer, Michael, Lobe, Elisabeth, Röhrig-Zöllner, Melven, Schmiedinghoff, Gary, Schuhmacher, Peter K, Setyawati, Yoshinta, Weinert, Alexander

    Published 21-05-2024
    “…The rapid advancements in quantum computing necessitate a scientific and rigorous approach to the construction of a corresponding software ecosystem, a topic…”
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    Journal Article
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    High-performance computing of 1 / x i and exp ( ± x i ) for a vector of inputs x i on Alpha and IA-64 CPUs by Haidar Sharif, Md, Basermann, Achim, Seidel, Christian, Hunger, Axel

    Published in Journal of systems architecture (2008)
    “…The modern microprocessors have become more sophisticated, the performance of software on modern architectures has grown more and more difficult to dissect and…”
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    Journal Article