Search Results - "Bartels, Stefanie"

Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk by Brinkman, Arie B, Gu, Hongcang, Bartels, Stefanie J J, Zhang, Yingying, Matarese, Filomena, Simmer, Femke, Marks, Hendrik, Bock, Christoph, Gnirke, Andreas, Meissner, Alexander, Stunnenberg, Hendrik G

“…Cross-talk between DNA methylation and histone modifications drives the establishment of composite epigenetic signatures and is traditionally studied using…”
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Dynamic binding of RBPJ is determined by Notch signaling status by Castel, David, Mourikis, Philippos, Bartels, Stefanie J J, Brinkman, Arie B, Tajbakhsh, Shahragim, Stunnenberg, Hendrik G

“…Notch signaling plays crucial roles in mediating cell fate choices in all metazoans largely by specifying the transcriptional output of one cell in response to…”
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Characterization of genome-wide p53-binding sites upon stress response by Smeenk, Leonie, van Heeringen, Simon J, Koeppel, Max, van Driel, Marc A, Bartels, Stefanie J.J, Akkers, Robert C, Denissov, Sergei, Stunnenberg, Hendrik G, Lohrum, Marion

“…The tumor suppressor p53 is a sequence-specific transcription factor, which regulates the expression of target genes involved in different stress responses. To…”
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A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein by Bartels, Stefanie J J, Spruijt, Cornelia G, Brinkman, Arie B, Jansen, Pascal W T C, Vermeulen, Michiel, Stunnenberg, Hendrik G

“…DNA methylation is an epigenetic modification that plays a crucial role in a variety of biological processes. Methylated DNA is specifically bound by…”
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MK3 modulation affects BMI1-dependent and independent cell cycle check-points by Prickaerts, Peggy, Niessen, Hanneke E C, Dahlmans, Vivian E H, Spaapen, Frank, Salvaing, Juliette, Vanhove, Jolien, Geijselaers, Claudia, Bartels, Stefanie J J, Partouns, Iris, Neumann, Dietbert, Speel, Ernst-Jan, Takihara, Yoshihiro, Wouters, Bradly G, Voncken, Jan Willem

“…Although the MK3 gene was originally found deleted in some cancers, it is highly expressed in others. The relevance of MK3 for oncogenesis is currently not…”
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Genome-wide binding of MBD2 reveals strong preference for highly methylated loci by Menafra, Roberta, Brinkman, Arie B, Matarese, Filomena, Franci, Gianluigi, Bartels, Stefanie J J, Nguyen, Luan, Shimbo, Takashi, Wade, Paul A, Hubner, Nina C, Stunnenberg, Hendrik G

“…MBD2 is a subunit of the NuRD complex that is postulated to mediate gene repression via recruitment of the complex to methylated DNA. In this study we adopted…”
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CDK2AP1/DOC-1 is a bona fide subunit of the Mi-2/NuRD complex by Spruijt, Cornelia G, Bartels, Stefanie J J, Brinkman, Arie B, Tjeertes, Jorrit V, Poser, Ina, Stunnenberg, Hendrik G, Vermeulen, Michiel

“…The Mi-2/NuRD (NUcleosome Remodeling and histone Deacetylase) chromatin remodeling complex is a large heterogeneous multiprotein complex associated with…”
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Dynamic binding of RBPJ is determined by Notch signaling status by Castel, David, Mourikis, Philippos, Bartels, Stefanie J.J., Brinkman, Arie B., Tajbakhsh, Shahragim, Stunnenberg, Hendrik G.

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Characterization of low affinity Fc[gamma] receptor biotinylation under controlled reaction conditions by mass spectrometry and ligand binding analysis by Geuijen, Karin PM, Egging, David F, Bartels, Stefanie, Schouten, Jan, Schasfoort, Richard B, Eppink, Michel H

“…Chemical protein biotinylation and streptavidin or anti-biotin-based capture is regularly used for proteins as a more controlled alternative to direct coupling…”
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Characterization of low affinity Fcγ receptor biotinylation under controlled reaction conditions by mass spectrometry and ligand binding analysis by Geuijen, Karin P.M., Egging, David F., Bartels, Stefanie, Schouten, Jan, Schasfoort, Richard B., Eppink, Michel H.

“…Chemical protein biotinylation and streptavidin or anti‐biotin‐based capture is regularly used for proteins as a more controlled alternative to direct coupling…”
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MK3 Modulation Affects BMI1-Dependent and Independent Cell Cycle Check-Points: e0118840 by Prickaerts, Peggy, Niessen, Hanneke EC, Dahlmans, Vivian EH, Spaapen, Frank, Salvaing, Juliette, Vanhove, Jolien, Geijselaers, Claudia, Bartels, Stefanie JJ, Partouns, Iris, Neumann, Dietbert

“…Although the MK3 gene was originally found deleted in some cancers, it is highly expressed in others. The relevance of MK3 for oncogenesis is currently not…”
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