Search Results - "Barai, Ram"

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    PBITV3: A robust and comprehensive tool for screening pathogenic proteomes for drug targets and prioritizing vaccine candidates by Chakraborty, Shuvechha, Askari, Mehdi, Barai, Ram Shankar, Idicula‐Thomas, Susan

    Published in Protein science (01-02-2024)
    “…Rise of life‐threatening superbugs, pandemics and epidemics warrants the need for cost‐effective and novel pharmacological interventions. Availability of…”
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    Journal Article
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    A triad of telomerase, androgen receptor and early growth response 1 in prostate cancer cells by Jacob, Sheeba, Nayak, Sumeet, Kakar, Ruchi, Chaudhari, Uddhav K., Joshi, Dolly, Vundinti, Babu R., Fernandes, Gwendolyn, Barai, Ram S., Kholkute, Sanjeeva D., Sachdeva, Geetanjali

    Published in Cancer biology & therapy (02-04-2016)
    “…Telomerase activation is one of the key mechanisms that allow cells to bypass replicative senescence. Telomerase activity is primarily regulated at the level…”
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    Enrichment analyses of diseases and pathways associated with precocious puberty using PrecocityDB by Sharma, Mridula, Kundu, Indra, Barai, Ram Shankar, Bhaye, Sameeksha, Desai, Karishma, Pokar, Khushal, Idicula-Thomas, Susan

    Published in Scientific reports (18-02-2021)
    “…Precocious puberty (PP) is an important endocrine disorder affecting children globally. Several genes, SNPs and comorbidities are reported to be associated…”
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    Journal Article
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    CAMPR3: a database on sequences, structures and signatures of antimicrobial peptides by Waghu, Faiza Hanif, Barai, Ram Shankar, Gurung, Pratima, Idicula-Thomas, Susan

    Published in Nucleic acids research (04-01-2016)
    “…Antimicrobial peptides (AMPs) are known to have family-specific sequence composition, which can be mined for discovery and design of AMPs. Here, we present…”
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    Journal Article
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    CAMPR4: a database of natural and synthetic antimicrobial peptides by Gawde, Ulka, Chakraborty, Shuvechha, Waghu, Faiza Hanif, Barai, Ram Shankar, Khanderkar, Ashlesha, Indraguru, Rishikesh, Shirsat, Tanmay, Idicula-Thomas, Susan

    Published in Nucleic acids research (06-01-2023)
    “…There has been an exponential increase in the design of synthetic antimicrobial peptides (AMPs) for its use as novel antibiotics. Synthetic AMPs are…”
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    Journal Article
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    CAMP: Collection of sequences and structures of antimicrobial peptides by Waghu, Faiza Hanif, Gopi, Lijin, Barai, Ram Shankar, Ramteke, Pranay, Nizami, Bilal, Idicula-Thomas, Susan

    Published in Nucleic acids research (01-01-2014)
    “…Antimicrobial peptides (AMPs) are gaining importance as anti-infective agents. Here we describe the updated Collection of Antimicrobial Peptide (CAMP)…”
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    PCOSKB: A KnowledgeBase on genes, diseases, ontology terms and biochemical pathways associated with PolyCystic Ovary Syndrome by Joseph, Shaini, Barai, Ram Shankar, Bhujbalrao, Rasika, Idicula-Thomas, Susan

    Published in Nucleic acids research (04-01-2016)
    “…Polycystic ovary syndrome (PCOS) is one of the major causes of female subfertility worldwide and ≈ 7-10% of women in reproductive age are affected by it. The…”
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    CAMP: a useful resource for research on antimicrobial peptides by Thomas, Shaini, Karnik, Shreyas, Barai, Ram Shankar, Jayaraman, V.K, Idicula-Thomas, Susan

    Published in Nucleic acids research (01-01-2010)
    “…Antimicrobial peptides (AMPs) are gaining popularity as better substitute to antibiotics. These peptides are shown to be active against several bacteria,…”
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    PBIT V3 : A robust and comprehensive tool for screening pathogenic proteomes for drug targets and prioritizing vaccine candidates by Chakraborty, Shuvechha, Askari, Mehdi, Barai, Ram Shankar, Idicula-Thomas, Susan

    Published in Protein science (01-02-2024)
    “…Rise of life-threatening superbugs, pandemics and epidemics warrants the need for cost-effective and novel pharmacological interventions. Availability of…”
    Get full text
    Journal Article
  12. 12

    EpiCandIn: An open online resource for epidemiology of Candida infections in India by Rahate, Kshitija, Arshi, Anam, Barai, Ram Shankar, Chakraborty, Shuvechha, Idicula-Thomas, Susan

    “…Background & objectives Candida spp. cause candidiasis in humans under conditions disrupting the host defence. While Candida albicans is the most reported…”
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    Leveraging family-specific signatures for AMP discovery and high-throughput annotation by Waghu, Faiza Hanif, Barai, Ram Shankar, Idicula-Thomas, Susan

    Published in Scientific reports (19-04-2016)
    “…Antimicrobial peptides (AMPs) are diverse, biologically active, essential components of the innate immune system. As compared to conventional antibiotics, AMPs…”
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    Journal Article
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    Exploring the druggable proteome of Candida species through comprehensive computational analysis by Mukherjee, Shuvechha, Kundu, Indra, Askari, Mehdi, Barai, Ram Shankar, Venkatesh, K.V., Idicula-Thomas, Susan

    Published in Genomics (San Diego, Calif.) (01-03-2021)
    “…Candida albicans and non-albicans Candida spp. are major cause of systemic mycoses. Antifungal drugs such as azoles and polyenes are not efficient to…”
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    Journal Article
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    PBIT: Pipeline Builder for Identification of drug Targets for infectious diseases by Shende, Gauri, Haldankar, Harshala, Barai, Ram Shankar, Bharmal, Mohammed Husain, Shetty, Vinit, Idicula-Thomas, Susan

    Published in Bioinformatics (Oxford, England) (15-03-2017)
    “…PBIT (Pipeline Builder for Identification of drug Targets) is an online webserver that has been developed for screening of microbial proteomes for critical…”
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    Journal Article
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    PCOSKBR2: a database of genes, diseases, pathways, and networks associated with polycystic ovary syndrome by Sharma, Mridula, Barai, Ram Shankar, Kundu, Indra, Bhaye, Sameeksha, Pokar, Khushal, Idicula-Thomas, Susan

    Published in Scientific reports (07-09-2020)
    “…PolyCystic Ovary Syndrome KnowledgeBase (PCOSKB R2 ) is a manually curated database with information on 533 genes, 145 SNPs, 29 miRNAs, 1,150 pathways, and…”
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    PCOSKB R2 : a database of genes, diseases, pathways, and networks associated with polycystic ovary syndrome by Sharma, Mridula, Barai, Ram Shankar, Kundu, Indra, Bhaye, Sameeksha, Pokar, Khushal, Idicula-Thomas, Susan

    Published in Scientific reports (07-09-2020)
    “…PolyCystic Ovary Syndrome KnowledgeBase (PCOSKB ) is a manually curated database with information on 533 genes, 145 SNPs, 29 miRNAs, 1,150 pathways, and 1,237…”
    Get full text
    Journal Article
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