Search Results - "Bandrowski, Anita E"

RRIDs: A Simple Step toward Improving Reproducibility through Rigor and Transparency of Experimental Methods by Bandrowski, Anita E., Martone, Maryann E.

“…With the call for more rigorous scientific reporting, authentication, and transparency from the scientific community and funding agencies, one critical step is…”
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Open Science 2.0: Towards a truly collaborative research ecosystem by Thibault, Robert T, Amaral, Olavo B, Argolo, Felipe, Bandrowski, Anita E, Davidson, Alexandra R, Drude, Natascha I

“…Conversations about open science have reached the mainstream, yet many open science practices such as data sharing remain uncommon. Our efforts towards…”
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Incidences of problematic cell lines are lower in papers that use RRIDs to identify cell lines by Babic, Zeljana, Capes-Davis, Amanda, Martone, Maryann E, Bairoch, Amos, Ozyurt, I Burak, Gillespie, Thomas H, Bandrowski, Anita E

“…The use of misidentified and contaminated cell lines continues to be a problem in biomedical research. Research Resource Identifiers (RRIDs) should reduce the…”
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Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature by Ozyurt, Ibrahim Burak, Grethe, Jeffrey S, Martone, Maryann E, Bandrowski, Anita E

“…The NIF Registry developed and maintained by the Neuroscience Information Framework is a cooperative project aimed at cataloging research resources, e.g.,…”
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Big data from small data: data-sharing in the 'long tail' of neuroscience by Ferguson, Adam R, Nielson, Jessica L, Cragin, Melissa H, Bandrowski, Anita E, Martone, Maryann E

“…In this Commentary, Martone and colleagues discuss the potential benefits of sharing small datasets, also called “long-tail” data, in the Neuroscience…”
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Modulation of epileptiform activity by glutamine and system A transport in a model of post-traumatic epilepsy by Tani, Hiroaki, Bandrowski, Anita E, Parada, Isabel, Wynn, Michelle, Huguenard, John R, Prince, David A, Reimer, Richard J

“…Abstract Epileptic activity arises from an imbalance in excitatory and inhibitory synaptic transmission. To determine if alterations in the metabolism of…”
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Opinion: Independent third-party entities as a model for validation of commercial antibodies by Laflamme, Carl, Edwards, Aled M., Bandrowski, Anita E., McPherson, Peter S.

“…•Antibody characterization pipeline for commercial antibodies.•Antibody characterization using CRISPR/Cas9 knockout controls.•An independent, 3rd party…”
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Improving transparency and scientific rigor in academic publishing by Prager, Eric M., Chambers, Karen E., Plotkin, Joshua L., McArthur, David L., Bandrowski, Anita E., Bansal, Nidhi, Martone, Maryann E., Bergstrom, Hadley C., Bespalov, Anton, Graf, Chris

“…Progress in basic and clinical research is slowed when researchers fail to provide a complete and accurate report of how a study was designed, executed, and…”
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OMICtools: an informative directory for multi-omic data analysis by Henry, Vincent J, Bandrowski, Anita E, Pepin, Anne-Sophie, Gonzalez, Bruno J, Desfeux, Arnaud

“…Recent advances in 'omic' technologies have created unprecedented opportunities for biological research, but current software and database resources are…”
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Comparing the Use of Research Resource Identifiers and Natural Language Processing for Citation of Databases, Software, and Other Digital Artifacts by Hsu, Chun-Nan, Bandrowski, Anita E., Gillespie, Thomas H., Udell, Jon, Lin, Ko-Wei, Ozyurt, Ibrahim Burak, Grethe, Jeffrey S., Martone, Maryann E.

“…The Research Resource Identifier (RRID) was introduced in 2014 to better identify biomedical research resources and track their use across the literature,…”
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Improving transparency and scientific rigor in academic publishing by Prager, Eric M., Chambers, Karen E., Plotkin, Joshua L., McArthur, David L., Bandrowski, Anita E., Bansal, Nidhi, Martone, Maryann E., Bergstrom, Hadley C., Bespalov, Anton, Graf, Chris

“…ABSTRACT Progress in basic and clinical research is slowed when researchers fail to provide a complete and accurate report of how a study was designed,…”
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Improving transparency and scientific rigor in academic publishing by Prager, Eric M., Chambers, Karen E., Plotkin, Joshua L., McArthur, David L., Bandrowski, Anita E., Bansal, Nidhi, Martone, Maryann E., Bergstrom, Hadley C., Bespalov, Anton, Graf, Chris

“…Progress in basic and clinical research is slowed when researchers fail to provide a complete and accurate report of how a study was designed, executed, and…”
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Extending the NIF DISCO framework to automate complex workflow: coordinating the harvest and integration of data from diverse neuroscience information resources by Marenco, Luis N, Wang, Rixin, Bandrowski, Anita E, Grethe, Jeffrey S, Shepherd, Gordon M, Miller, Perry L

“…This paper describes how DISCO, the data aggregator that supports the Neuroscience Information Framework (NIF), has been extended to play a central role in…”
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Cortical Injury Affects Short-Term Plasticity of Evoked Excitatory Synaptic Currents by Li, Huifang, Bandrowski, Anita E, Prince, David A

“…Departments of Neurology and Neurological Sciences, Stanford University Medical Center, Stanford, California Submitted 30 June 2004; accepted in final form 30…”
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Improving Scientific Rigor and Reproducibility: Check Research Resources Information When Planning Experiments Using dkNET by Lin, Ko-Wei, Bandrowski, Anita E., Guo, Vicky, Hsu, Chun-Nan, Ozyurt, Ibrahim B., Pascual, Leo, Grethe, Jeffrey S., Martone, Maryann E.

“…Abstract only Transparency of information on the effectiveness of research resources such as cell lines and antibodies is critical for enhancing scientific…”
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dkNET (NIDDK Information Network): Research tools that assist scientists in improving the rigor and reproducibility of their research by Lin, Ko‐Wei, Bandrowski, Anita E., Gillespie, Tom, Go, James, Hagstrom, Stephanie, Hsu, Chun‐Nan, Ozyurt, Ibrahim B., Grethe, Jeffrey S., Martone, Maryann E.

“…The use of problematic resources such as contaminated or misidentified cell lines and cross‐reactive antibodies lead to reproducibility problems. Research has…”
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Role of muscarinic receptors, G-proteins, and intracellular messengers in muscarinic modulation of NMDA receptor-mediated synaptic transmission by Aramakis, V. Bessie, Bandrowski, Anita E., Ashe, John H.

“…Previously, we reported that activation of muscarinic receptors modulates N‐methyl‐D‐aspartate (NMDA) receptor‐mediated synaptic transmission in auditory…”
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Activation of muscarinic receptors modulates NMDA receptor-mediated responses in auditory cortex by ARAMAKIS, V. B, BANDROWSKI, A. E, ASHE, J. H

“…The present study examines the ability of muscarinic receptor activation to modulate glutamatergic responses in the in vitro rat auditory cortex. Whole-cell…”
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Muscarinic reduction of GABAergic synaptic potentials results in disinhibition of the AMPA/kainate-mediated EPSP in auditory cortex by Bessie Aramakis, V., Bandrowski, Anita E., Ashe, John H.

“…The present study is concerned with the ability of muscarinic actions of acetylcholine (ACh) to modulate glutamate and γ-aminobutyric acid (GABA)-mediated…”
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