Search Results - "Bandara, Y M Nuwan D Y"

Surveying silicon nitride nanopores for glycomics and heparin quality assurance by Karawdeniya, Buddini Iroshika, Bandara, Y. M. Nuwan D. Y., Nichols, Jonathan W., Chevalier, Robert B., Dwyer, Jason R.

“…Polysaccharides have key biological functions and can be harnessed for therapeutic roles, such as the anticoagulant heparin. Their complexity—e.g., >100…”
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Adeno-associated virus characterization for cargo discrimination through nanopore responsiveness by Karawdeniya, Buddini Iroshika, Bandara, Y M Nuwan D Y, Khan, Aminul Islam, Chen, Wei Tong, Vu, Hoang-Anh, Morshed, Adnan, Suh, Junghae, Dutta, Prashanta, Kim, Min Jun

“…Solid-state nanopore (SSN)-based analytical methods have found abundant use in genomics and proteomics with fledgling contributions to virology - a clinically…”
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Nanopore Current Enhancements Lack Protein Charge Dependence and Elucidate Maximum Unfolding at Protein’s Isoelectric Point by Bandara, Y. M. Nuwan D. Y, Farajpour, Nasim, Freedman, Kevin J

“…Protein sequencing, as well as protein fingerprinting, has gained tremendous attention in the electrical sensing realm of solid-state nanopores and is…”
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On the origins of conductive pulse sensing inside a nanopore by Lastra, Lauren S., Bandara, Y. M. Nuwan D. Y., Nguyen, Michelle, Farajpour, Nasim, Freedman, Kevin J.

“…Nanopore sensing is nearly synonymous with resistive pulse sensing due to the characteristic occlusion of ions during pore occupancy, particularly at high salt…”
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Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore by Saharia, Jugal, Bandara, Y. M. Nuwan D. Y, Karawdeniya, Buddini I, Hammond, Cassandra, Alexandrakis, George, Kim, Min Jun

“…Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte…”
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Chemically Functionalizing Controlled Dielectric Breakdown Silicon Nitride Nanopores by Direct Photohydrosilylation by Bandara, Y. M. Nuwan D. Y, Karawdeniya, Buddini I, Hagan, James T, Chevalier, Robert B, Dwyer, Jason R

“…Nanopores are a prominent enabling tool for single-molecule applications such as DNA sequencing, protein profiling, and glycomics, and the construction of…”
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Investigating protein translocation in the presence of an electrolyte concentration gradient across a solid‐state nanopore by Saharia, Jugal, Bandara, Y. M. Nuwan D. Y., Kim, Min Jun

“…Electrolyte chemistry plays an important role in the transport properties of analytes through nanopores. Here, we report the translocation properties of the…”
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Stiffness measurement of nanosized liposomes using solid‐state nanopore sensor with automated recapturing platform by Lee, Jung Soo, Saharia, Jugal, Bandara, Y. M. Nuwan D. Y., Karawdeniya, Buddini Iroshika, Goyal, Gaurav, Darvish, Armin, Wang, Qingxiao, Kim, Moon J., Kim, Min Jun

“…This paper describes a method to gauge the stiffness of nanosized liposomes – a nanoscale vesicle – using a custom‐made recapture platform coupled to a…”
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Fabrication of hexagonal boron nitride based 2D nanopore sensor for the assessment of electro‐chemical responsiveness of human serum transferrin protein by Saharia, Jugal, Bandara, Y. M. Nuwan D. Y., Lee, Jung Soo, Wang, Qingxiao, Kim, Moon J., Kim, Min Jun

“…In this work, we present a step‐by‐step workflow for the fabrication of 2D hexagonal boron nitride (h‐BN) nanopores which are then used to sense holo‐human…”
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Real-Time Profiling of Solid-State Nanopores During Solution-Phase Nanofabrication by Bandara, Y. M. Nuwan D. Y, Karawdeniya, Buddini Iroshika, Dwyer, Jason R

“…We describe a method for simply characterizing the size and shape of a nanopore during solution-based fabrication and surface modification, using only…”
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Assessment of 1/f noise associated with nanopores fabricated through chemically tuned controlled dielectric breakdown by Saharia, Jugal, Bandara, Y. M. Nuwan D. Y., Karawdeniya, Buddini I., Alexandrakis, George, Kim, Min Jun

“…Recently, we developed a fabrication method—chemically‐tuned controlled dielectric breakdown (CT‐CDB)—that produces nanopores (through thin silicon nitride…”
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Push-Button Method To Create Nanopores Using a Tesla-Coil Lighter by Bandara, Y. M. Nuwan D. Y, Karawdeniya, Buddini I, Dwyer, Jason R

“…Controlled dielectric breakdown (CDB) of silicon nitride thin films immersed in electrolyte solution has been used to fabricate single nanofluidic channels…”
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Mechanical characterization of vesicles and cells: A review by Morshed, Adnan, Karawdeniya, Buddini Iroshika, Bandara, Y.M. Nuwan D.Y., Kim, Min Jun, Dutta, Prashanta

“…Vesicles perform many essential functions in all living organisms. They respond like a transducer to mechanical stress in converting the applied force into…”
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Synthetic β‐Cyclodextrin Dimers for Squaraine Binding: Effect of Host Architecture on Photophysical Properties, Aggregate Formation and Chemical Reactivity by Chaudhuri, Sauradip, Verderame, Molly, Mako, Teresa L., Bandara, Y. M. Nuwan D. Y., Fernando, Ashvin I., Levine, Mindy

“…Reported herein is the synthesis and application of three novel β‐cyclodextrin dimer hosts for the complexation of near infrared (NIR) squaraine dyes in…”
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Surface Functionalization and Texturing of Optical Metasurfaces for Sensing Applications by Karawdeniya, Buddini I., Damry, Adam M., Murugappan, Krishnan, Manjunath, Shridhar, Bandara, Y. M. Nuwan D. Y., Jackson, Colin J., Tricoli, Antonio, Neshev, Dragomir

“…Optical metasurfaces are planar metamaterials that can mediate highly precise light–matter interactions. Because of their unique optical properties, both…”
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Nanopore Data Analysis: Baseline Construction and Abrupt Change-Based Multilevel Fitting by Bandara, Y. M. Nuwan D. Y, Saharia, Jugal, Karawdeniya, Buddini I, Kluth, Patrick, Kim, Min Jun

“…Solid-state nanopore technology delivers single-molecule resolution information, and the quality of the deliverables hinges on the capability of the analysis…”
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Molecular-Level Profiling of Human Serum Transferrin Protein through Assessment of Nanopore-Based Electrical and Chemical Responsiveness by Saharia, Jugal, Bandara, Y. M. Nuwan D. Y, Goyal, Gaurav, Lee, Jung Soo, Karawdeniya, Buddini Iroshika, Kim, Min Jun

“…In this study, we investigated the voltage and pH responsiveness of human serum transferrin (hSTf) protein using silicon nitride (Si x N y ) nanopores. The…”
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Characterization of Flagellar Filaments and Flagellin through Optical Microscopy and Label-Free Nanopore Responsiveness by D. Y. Bandara, Y. M. Nuwan, Tang, Jiannan, Saharia, Jugal, Rogowski, Louis William, Ahn, Chi Won, Kim, Min Jun

“…In this study, we investigated the translocation characteristics of flagellar filaments (Salmonella typhimurium) and flagellin subunits through silicon nitride…”
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Solution-Based Photo-Patterned Gold Film Formation on Silicon Nitride by Bandara, Y. M. Nuwan D. Y, Karawdeniya, Buddini Iroshika, Whelan, Julie C, Ginsberg, Lucas D. S, Dwyer, Jason R

“…Silicon nitride fabricated by low-pressure chemical vapor deposition (LPCVD) to be silicon-rich (SiN x ), is a ubiquitous insulating thin film in the…”
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Chemically tailoring nanopores for single-molecule sensing and glycomics by Hagan, James T., Sheetz, Brian S., Bandara, Y.M. Nuwan D.Y., Karawdeniya, Buddini I., Morris, Melissa A., Chevalier, Robert B., Dwyer, Jason R.

“…A nanopore can be fairly—but uncharitably—described as simply a nanofluidic channel through a thin membrane. Even this simple structural description holds…”
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