Search Results - "Baker, Dave J"
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1
A One Health Perspective on Salmonella enterica Serovar Infantis, an Emerging Human Multidrug-Resistant Pathogen
Published in Emerging infectious diseases (01-04-2024)“…Salmonella enterica serovar Infantis presents an ever-increasing threat to public health because of its spread throughout many countries and association with…”
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Application of TraDIS to define the core essential genome of Campylobacter jejuni and Campylobacter coli
Published in BMC microbiology (06-04-2023)“…Campylobacter species are the major cause of bacterial gastroenteritis. As there is no effective vaccine, combined with the rapid increase in antimicrobial…”
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Induced Burkholderia prophages detected from the hemoculture: a biomarker for Burkholderia pseudomallei infection
Published in Frontiers in microbiology (02-04-2024)“…Bacteriophages (phages), viruses that infect bacteria, are found in abundance not only in the environment but also in the human body. The use of phages for the…”
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Genomic characterization of colistin-resistant Klebsiella pneumoniae isolated from intensive care unit patients in Egypt
Published in Annals of clinical microbiology and antimicrobials (09-09-2023)“…Abstract Background Egypt has witnessed elevated incidence rates of multidrug-resistant Klebsiella pneumonia e infections in intensive care units (ICUs). The…”
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Differential temporal release and lipoprotein loading in B. thetaiotaomicron bacterial extracellular vesicles
Published in Journal of extracellular vesicles (01-01-2024)“…Bacterial extracellular vesicles (BEVs) contribute to stress responses, quorum sensing, biofilm formation and interspecies and interkingdom communication…”
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Genomic analysis of Elizabethkingia species from aquatic environments: Evidence for potential clinical transmission
Published in Current research in microbial sciences (01-01-2022)“…•Identification of closely related (< 50 SNV) clinical and environmental aquatic Elizabethkingia anophelis isolates.•Identification of a provisional novel…”
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Genomic Analysis of Carbapenem-Resistant Comamonas in Water Matrices: Implications for Public Health and Wastewater Treatments
Published in Applied and environmental microbiology (12-07-2022)“…Comamonas spp. are Gram-negative bacteria that catabolize a wide range of organic and inorganic substrates. Comamonas spp. are abundant in aquatic and soil…”
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Identification, activity and delivery of new LysFA67 endolysin to target cheese spoilage Clostridium tyrobutyricum
Published in Food microbiology (01-02-2024)“…Bacteriophages and their endolysins are potential biocontrol agents for the anaerobic spoilage organism Clostridium tyrobutyricum, which causes cheese late…”
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CoronaHiT: high-throughput sequencing of SARS-CoV-2 genomes
Published in Genome medicine (09-02-2021)“…We present CoronaHiT, a platform and throughput flexible method for sequencing SARS-CoV-2 genomes (≤ 96 on MinION or > 96 on Illumina NextSeq) depending on…”
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Nanopore and Illumina sequencing reveal different viral populations from human gut samples
Published in Microbial genomics (01-04-2024)“…The advent of viral metagenomics, or viromics, has improved our knowledge and understanding of global viral diversity. High-throughput sequencing technologies…”
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