Search Results - "Baker, D. D."

KrakenUniq: confident and fast metagenomics classification using unique k-mer counts by Breitwieser, F P, Baker, D N, Salzberg, S L

“…False-positive identifications are a significant problem in metagenomics classification. We present KrakenUniq, a novel metagenomics classifier that combines…”
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Don't touch that dial: Psychological reactance, transparency, and user acceptance of smart thermostat setting changes by Heatherly, Matthew, Baker, D A, Canfield, Casey

“…Automation inherently removes a certain amount of user control. If perceived as a loss of freedom, users may experience psychological reactance, which is a…”
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Caffeine in Floral Nectar Enhances a Pollinator's Memory of Reward by Wright, G. A., Baker, D. D., Palmer, M. J., Stabler, D., Mustard, J. A., Power, E. F., Borland, A. M., Stevenson, P. C.

“…Plant defense compounds occur in floral nectar, but their ecological role is not well understood. We provide evidence that plant compounds pharmacologically…”
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Stigma, HIV and health: a qualitative synthesis by Chambers, Lori A, Rueda, Sergio, Baker, D Nico, Wilson, Michael G, Deutsch, Rachel, Raeifar, Elmira, Rourke, Sean B

“…HIV-related stigma continues to negatively impact the health and well-being of people living with HIV, with deleterious effects on their care, treatment and…”
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Robust deep learning-based protein sequence design using ProteinMPNN by Dauparas, J, Anishchenko, I, Bennett, N, Bai, H, Ragotte, R J, Milles, L F, Wicky, B I M, Courbet, A, de Haas, R J, Bethel, N, Leung, P J Y, Huddy, T F, Pellock, S, Tischer, D, Chan, F, Koepnick, B, Nguyen, H, Kang, A, Sankaran, B, Bera, A K, King, N P, Baker, D

“…Although deep learning has revolutionized protein structure prediction, almost all experimentally characterized de novo protein designs have been generated…”
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COVID‐19 vaccine‐readiness for anti‐CD20‐depleting therapy in autoimmune diseases by Baker, D., Roberts, C. A. K., Pryce, G., Kang, A. S., Marta, M., Reyes, S., Schmierer, K., Giovannoni, G., Amor, S.

“…Based on the known and emerging biology of autoimmune diseases and COVID‐19, it was hypothesised that whilst B‐cell depletion should not necessarily expose…”
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Innate immunity during SARS‐CoV‐2: evasion strategies and activation trigger hypoxia and vascular damage by Amor, S., Fernández Blanco, L., Baker, D.

“…SARS‐CoV‐2 exploits many strategies to subvert innate immune responses allowing the virus to replicate and disseminate within the host. The extent to which the…”
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Senescent Cells: A Novel Therapeutic Target for Aging and Age-Related Diseases by Naylor, R M, Baker, D J, van Deursen, J M

“…Aging is the main risk factor for most chronic diseases, disabilities, and declining health. It has been proposed that senescent cells—damaged cells that have…”
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Understanding the Mechanisms of Radiation Belt Dropouts Observed by Van Allen Probes by Xiang, Zheng, Tu, Weichao, Li, Xinlin, Ni, Binbin, Morley, S. K., Baker, D. N.

“…To achieve a better understanding of the dominant loss mechanisms for the rapid dropouts of radiation belt electrons, three distinct radiation belt dropout…”
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Electron-scale dynamics of the diffusion region during symmetric magnetic reconnection in space by Torbert, R B, Burch, J L, Phan, T D, Hesse, M, Argall, M R, Shuster, J, Ergun, R E, Alm, L, Nakamura, R, Genestreti, K J, Gershman, D J, Paterson, W R, Turner, D L, Cohen, I, Giles, B L, Pollock, C J, Wang, S, Chen, L-J, Stawarz, J E, Eastwood, J P, Hwang, K J, Farrugia, C, Dors, I, Vaith, H, Mouikis, C, Ardakani, A, Mauk, B H, Fuselier, S A, Russell, C T, Strangeway, R J, Moore, T E, Drake, J F, Shay, M A, Khotyaintsev, Yuri V, Lindqvist, P-A, Baumjohann, W, Wilder, F D, Ahmadi, N, Dorelli, J C, Avanov, L A, Oka, M, Baker, D N, Fennell, J F, Blake, J B, Jaynes, A N, Le Contel, O, Petrinec, S M, Lavraud, B, Saito, Y

“…Magnetic reconnection is an energy conversion process that occurs in many astrophysical contexts including Earth's magnetosphere, where the process can be…”
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Characterization of gut microbiomes in nonalcoholic steatohepatitis (NASH) patients: A connection between endogenous alcohol and NASH by Zhu, Lixin, Baker, Susan S., Gill, Chelsea, Liu, Wensheng, Alkhouri, Razan, Baker, Robert D., Gill, Steven R.

“…Nonalcoholic steatohepatitis (NASH) is a serious liver disease associated with obesity. Characterized by metabolic syndrome, hepatic steatosis, and liver…”
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Pathogenesis of nonalcoholic steatohepatitis by Liu, Wensheng, Baker, Robert D., Bhatia, Tavleen, Zhu, Lixin, Baker, Susan S.

“…Nonalcoholic steatohepatitis (NASH) is a severe form of nonalcoholic fatty liver disease and a risk factor for cirrhosis and hepatocellular carcinoma. The…”
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Space Weather Effects in the Earth’s Radiation Belts by Baker, D. N., Erickson, P. J., Fennell, J. F., Foster, J. C., Jaynes, A. N., Verronen, P. T.

“…The first major scientific discovery of the Space Age was that the Earth is enshrouded in toroids, or belts, of very high-energy magnetically trapped charged…”
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Acceleration of Particles to High Energies in Earth’s Radiation Belts by Millan, R. M., Baker, D. N.

“…Discovered in 1958, Earth’s radiation belts persist in being mysterious and unpredictable. This highly dynamic region of near-Earth space provides an important…”
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Wave-driven butterfly distribution of Van Allen belt relativistic electrons by Xiao, Fuliang, Yang, Chang, Su, Zhenpeng, Zhou, Qinghua, He, Zhaoguo, He, Yihua, Baker, D. N., Spence, H. E., Funsten, H. O., Blake, J. B.

“…Van Allen radiation belts consist of relativistic electrons trapped by Earth's magnetic field. Trapped electrons often drift azimuthally around Earth and…”
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The Black Men’s Health Forum: Improving Health Knowledge and Willingness to Participate in Research by Lloyd, Shawnta L., Williams, Kelvin L., Pastors Network, Triad, Caban-Holt, Allison, Craft, Suzanne, D. Baker, Laura, Byrd, Goldie S.

“…The Black Men’s Health Forum, a 6-week online health education intervention for African American men and accountability partners of African American men, was…”
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Painful and painless mutations of SCN9A and SCN11A voltage-gated sodium channels by Baker, Mark D., Nassar, Mohammed A.

“…Chronic pain is a global problem affecting up to 20% of the world’s population and has a significant economic, social and personal cost to society. Sensory…”
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Rapid Precipitation of Relativistic Electron by EMIC Rising‐Tone Emissions Observed by the Van Allen Probes by Nakamura, S., Omura, Y., Kletzing, C., Baker, D. N.

“…On 23 February 2014, Van Allen Probes sensors observed quite strong electromagnetic ion cyclotron (EMIC) waves in the outer dayside magnetosphere. The maximum…”
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Rapid local acceleration of relativistic radiation-belt electrons by magnetospheric chorus by Thorne, R. M., Li, W., Ni, B., Ma, Q., Bortnik, J., Chen, L., Baker, D. N., Spence, H. E., Reeves, G. D., Henderson, M. G., Kletzing, C. A., Kurth, W. S., Hospodarsky, G. B., Blake, J. B., Fennell, J. F., Claudepierre, S. G., Kanekal, S. G.

“…High-resolution measurements of electrons obtained by satellite during the geomagnetic storm of 9 October 2012 together with a data-driven global wave model…”
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