Search Results - "BOND, DONNA M."

Small RNAs and heritable epigenetic variation in plants by Bond, Donna M, Baulcombe, David C

“…Highlights • sRNAs play a key role in the maintenance of DNA methylation from parent to progeny. • sRNA-mediated mechanisms have the ability to unlock the…”
Get full text

Epigenetic transitions leading to heritable, RNA-mediated de novo silencing in Arabidopsis thaliana by Bond, Donna M, Baulcombe, David C

“…In plants, RNA-directed DNA methylation (RdDM), a mechanism where epigenetic modifiers are guided to target loci by small RNAs, plays a major role in silencing…”
Get full text

Bio-On-Magnetic-Beads (BOMB): Open platform for high-throughput nucleic acid extraction and manipulation by Oberacker, Phil, Stepper, Peter, Bond, Donna M, Höhn, Sven, Focken, Jule, Meyer, Vivien, Schelle, Luca, Sugrue, Victoria J, Jeunen, Gert-Jan, Moser, Tim, Hore, Steven R, von Meyenn, Ferdinand, Hipp, Katharina, Hore, Timothy A, Jurkowski, Tomasz P

“…Current molecular biology laboratories rely heavily on the purification and manipulation of nucleic acids. Yet, commonly used centrifuge- and column-based…”
Get full text

The tuatara genome reveals ancient features of amniote evolution by Gemmell, Neil J., Rutherford, Kim, Prost, Stefan, Tollis, Marc, Winter, David, Macey, J. Robert, Adelson, David L., Suh, Alexander, Bertozzi, Terry, Grau, José H., Organ, Chris, Gardner, Paul P., Muffato, Matthieu, Patricio, Mateus, Billis, Konstantinos, Martin, Fergal J., Flicek, Paul, Petersen, Bent, Kang, Lin, Michalak, Pawel, Buckley, Thomas R., Wilson, Melissa, Cheng, Yuanyuan, Miller, Hilary, Schott, Ryan K., Jordan, Melissa D., Newcomb, Richard D., Arroyo, José Ignacio, Valenzuela, Nicole, Hore, Tim A., Renart, Jaime, Peona, Valentina, Peart, Claire R., Warmuth, Vera M., Zeng, Lu, Kortschak, R. Daniel, Raison, Joy M., Zapata, Valeria Velásquez, Wu, Zhiqiang, Santesmasses, Didac, Mariotti, Marco, Guigó, Roderic, Rupp, Shawn M., Twort, Victoria G., Dussex, Nicolas, Taylor, Helen, Abe, Hideaki, Bond, Donna M., Paterson, James M., Mulcahy, Daniel G., Gonzalez, Vanessa L., Barbieri, Charles G., DeMeo, Dustin P., Pabinger, Stephan, Van Stijn, Tracey, Clarke, Shannon, Ryder, Oliver, Edwards, Scott V., Salzberg, Steven L., Anderson, Lindsay, Nelson, Nicola, Stone, Clive

“…The tuatara ( Sphenodon punctatus )—the only living member of the reptilian order Rhynchocephalia (Sphenodontia), once widespread across Gondwana 1 , 2 —is an…”
Get full text

Coat colour in marsupials: genetic variants at the ASIP locus determine grey and black fur of the brushtail possum by Bond, Donna M, Veale, Andrew, Alexander, Alana, Hore, Timothy A

“…The possession of fur or hair is a defining characteristic of mammals and can occur in a variety of colours and patterns. While genetic determinants of coat…”
Get full text

Castration delays epigenetic aging and feminizes DNA methylation at androgen-regulated loci by Sugrue, Victoria J, Zoller, Joseph Alan, Narayan, Pritika, Lu, Ake T, Ortega-Recalde, Oscar J, Grant, Matthew J, Bawden, C Simon, Rudiger, Skye R, Haghani, Amin, Bond, Donna M, Hore, Reuben R, Garratt, Michael, Sears, Karen E, Wang, Nan, Yang, Xiangdong William, Snell, Russell G, Hore, Timothy A, Horvath, Steve

“…In mammals, females generally live longer than males. Nevertheless, the mechanisms underpinning sex-dependent longevity are currently unclear. Epigenetic…”
Get full text

The admixed brushtail possum genome reveals invasion history in New Zealand and novel imprinted genes by Bond, Donna M., Ortega-Recalde, Oscar, Laird, Melanie K., Hayakawa, Takashi, Richardson, Kyle S., Reese, Finlay.C. B., Kyle, Bruce, McIsaac-Williams, Brooke E., Robertson, Bruce C., van Heezik, Yolanda, Adams, Amy L., Chang, Wei-Shan, Haase, Bettina, Mountcastle, Jacquelyn, Driller, Maximilian, Collins, Joanna, Howe, Kerstin, Go, Yasuhiro, Thibaud-Nissen, Francoise, Lister, Nicholas C., Waters, Paul D., Fedrigo, Olivier, Jarvis, Erich D., Gemmell, Neil J., Alexander, Alana, Hore, Timothy A.

“…Combining genome assembly with population and functional genomics can provide valuable insights to development and evolution, as well as tools for species…”
Get full text

PRKACB is a novel imprinted gene in marsupials by Newman, Trent, Bond, Donna M, Ishihara, Teruhito, Rizzoli, Phoebe, Gouil, Quentin, Hore, Timothy A, Shaw, Geoff, Renfree, Marilyn B

“…Genomic imprinting results in parent-of-origin-specific gene expression and, among vertebrates, is found only in therian mammals: marsupials and eutherians. A…”
Get full text

The low temperature response pathways for cold acclimation and vernalization are independent by BOND, DONNA M., DENNIS, ELIZABETH S., FINNEGAN, E. JEAN

“…ABSTRACT Vernalization is the promotion of flowering in response to the prolonged cold of winter. To survive sub‐zero winter temperatures, plants must first…”
Get full text

A Point Mutation in Phytochromobilin synthase Alters the Circadian Clock and Photoperiodic Flowering of Medicago truncatula by Perez-Santangelo, Soledad, Napier, Nathanael, Robson, Fran, Weller, James L, Bond, Donna M, Macknight, Richard C

“…Plants use seasonal cues to initiate flowering at an appropriate time of year to ensure optimal reproductive success. The circadian clock integrates these…”
Get full text

Histone Acetylation, VERNALIZATION INSENSITIVE 3, FLOWERING LOCUS C, and the Vernalization Response by Bond, Donna M., Dennis, Elizabeth S., Pogson, Barry J., Finnegan, E. Jean

“…The quantitative induction of VIN3 by low temperatures is required for PRC2 repression of FLC and promotion of flowering (vernalization) in Arabidopsis…”
Get full text

Polycomb proteins regulate the quantitative induction of VERNALIZATION INSENSITIVE 3 in response to low temperatures by Jean Finnegan, E, Bond, Donna M, Buzas, Diana M, Goodrich, Justin, Helliwell, Christopher A, Tamada, Yosuke, Yun, Jae-Young, Amasino, Richard M, Dennis, Elizabeth S

“…Vernalization, the promotion of flowering in response to low temperatures, is one of the best characterized examples of epigenetic regulation in plants. The…”
Get full text

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs by Shivaprasad, Padubidri V., Chen, Ho-Ming, Patel, Kanu, Bond, Donna M., Santos, Bruno A.C.M., Baulcombe, David

“…Analysis of tomato (Solanum lycopersicum) small RNA data sets revealed the presence of a regulatory cascade affecting disease resistance. The initiators of the…”
Get full text

Hypoxia: A novel function for VIN3 by Bond, Donna M., Dennis, Elizabeth S., Finnegan, Elizabeth J.

“…VERNALIZATION INSENSITIVE 3 (VIN3) encodes a PHD domain chromatin remodelling protein that is induced in response to cold and is required for the establishment…”
Get full text

Correction: Castration delays epigenetic aging and feminizes DNA methylation at androgen-regulated loci by Sugrue, Victoria J, Zoller, Joseph Alan, Narayan, Pritika, Lu, Ake T, Ortega-Recalde, Oscar J, Grant, Matthew J, Bawden, C Simon, Rudiger, Skye R, Haghani, Amin, Bond, Donna M, Hore, Reuben R, Garratt, Michael, Sears, Karen E, Wang, Nan, Yang, Xiangdong William, Snell, Russell G, Hore, Timothy A, Horvath, Steve

Get full text

Publisher Correction: The tuatara genome reveals ancient features of amniote evolution by Gemmell, Neil J., Rutherford, Kim, Prost, Stefan, Tollis, Marc, Winter, David, Macey, J. Robert, Adelson, David L., Suh, Alexander, Bertozzi, Terry, Grau, José H., Organ, Chris, Gardner, Paul P., Muffato, Matthieu, Patricio, Mateus, Billis, Konstantinos, Martin, Fergal J., Flicek, Paul, Petersen, Bent, Kang, Lin, Michalak, Pawel, Buckley, Thomas R., Wilson, Melissa, Cheng, Yuanyuan, Miller, Hilary, Schott, Ryan K., Jordan, Melissa D., Newcomb, Richard D., Arroyo, José Ignacio, Valenzuela, Nicole, Hore, Tim A., Renart, Jaime, Peona, Valentina, Peart, Claire R., Warmuth, Vera M., Zeng, Lu, Kortschak, R. Daniel, Raison, Joy M., Zapata, Valeria Velásquez, Wu, Zhiqiang, Santesmasses, Didac, Mariotti, Marco, Guigó, Roderic, Rupp, Shawn M., Twort, Victoria G., Dussex, Nicolas, Taylor, Helen, Abe, Hideaki, Bond, Donna M., Paterson, James M., Mulcahy, Daniel G., Gonzalez, Vanessa L., Barbieri, Charles G., DeMeo, Dustin P., Pabinger, Stephan, Van Stijn, Tracey, Clarke, Shannon, Ryder, Oliver, Edwards, Scott V., Salzberg, Steven L., Anderson, Lindsay, Nelson, Nicola, Stone, Clive

“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
Get full text

VERNALIZATION INSENSITIVE 3 (VIN3) is required for the response of Arabidopsis thaliana seedlings exposed to low oxygen conditions by Bond, Donna M, Wilson, Iain W, Dennis, Elizabeth S, Pogson, Barry J, Jean Finnegan, E

“…VERNALIZATION INSENSITIVE 3 (VIN3), which is required for the vernalization-mediated epigenetic repression of FLOWERING LOCUS C (FLC) in Arabidopsis thaliana,…”
Get full text

Infiltration-RNAseq: transcriptome profiling of Agrobacterium-mediated infiltration of transcription factors to discover gene function and expression networks in plants by Bond, Donna M, Albert, Nick W, Lee, Robyn H, Gillard, Gareth B, Brown, Chris M, Hellens, Roger P, Macknight, Richard C

“…Transcription factors (TFs) coordinate precise gene expression patterns that give rise to distinct phenotypic outputs. The identification of genes and…”
Get full text

Passing the message on: inheritance of epigenetic traits by Bond, Donna M., Finnegan, E. Jean

“…Epigenetic modifiers play an important role in genome organization, stability and the control of gene expression. Three research groups that are exploring the…”
Get full text

Imprinted X chromosome inactivation in marsupials: The paternal X arrives at the egg with a silent DNA methylation profile by Milton, Ashley M, Marín-Gual, Laia, Lister, Nicholas C, McIntyre, Kim L, Grady, Patrick G S, Laird, Melanie K, Bond, Donna M, Hore, Timothy A, O'Neill, Rachel J, Pask, Andrew J, Renfree, Marilyn B, Ruiz-Herrera, Aurora, Waters, Paul D

“…X chromosome inactivation (XCI) is an epigenetic process that results in the transcriptional silencing of one X chromosome in the somatic cells of females…”
Get full text