Search Results - "BHATTACHARYA, Soumyaroop"

CX3CR1 as a respiratory syncytial virus receptor in pediatric human lung by Anderson, Christopher S., Chu, Chin-Yi, Wang, Qian, Mereness, Jared A., Ren, Yue, Donlon, Kathy, Bhattacharya, Soumyaroop, Misra, Ravi S., Walsh, Edward E., Pryhuber, Gloria S., Mariani, Thomas J.

“…Background Data on the host factors that contribute to infection of young children by respiratory syncytial virus (RSV) are limited. The human chemokine…”
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Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development by Du, Yina, Kitzmiller, Joseph A, Sridharan, Anusha, Perl, Anne K, Bridges, James P, Misra, Ravi S, Pryhuber, Gloria S, Mariani, Thomas J, Bhattacharya, Soumyaroop, Guo, Minzhe, Potter, S Steven, Dexheimer, Phillip, Aronow, Bruce, Jobe, Alan H, Whitsett, Jeffrey A, Xu, Yan

“…'LungGENS', our previously developed web tool for mapping single-cell gene expression in the developing lung, has been well received by the pulmonary research…”
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MicroRNA expression profiling defines the impact of electronic cigarettes on human airway epithelial cells by Solleti, Siva Kumar, Bhattacharya, Soumyaroop, Ahmad, Ausaf, Wang, Qian, Mereness, Jared, Rangasamy, Tirumalai, Mariani, Thomas J.

“…While all forms of tobacco exposure have negative health effects, the significance of exposure to electronic cigarettes (eCig) is not fully understood. Here,…”
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The effect of air pollution on the transcriptomics of the immune response to respiratory infection by Croft, Daniel P., Burton, David S., Nagel, David J., Bhattacharya, Soumyaroop, Falsey, Ann R., Georas, Steve N., Hopke, Philip K., Johnston, Carl J., Kottmann, R. Matthew, Litonjua, Augusto A., Mariani, Thomas J., Rich, David Q., Thevenet-Morrison, Kelly, Thurston, Sally W., Utell, Mark J., McCall, Matthew N.

“…Combustion related particulate matter air pollution (PM) is associated with an increased risk of respiratory infections in adults. The exact mechanism…”
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Type VI collagen promotes lung epithelial cell spreading and wound-closure by Mereness, Jared A, Bhattacharya, Soumyaroop, Wang, Qian, Ren, Yue, Pryhuber, Gloria S, Mariani, Thomas J

“…Basement membrane (BM) is an essential part of the extracellular matrix (ECM) that plays a crucial role in mechanical support and signaling to epithelial cells…”
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Integrated Genomic Analyses in Bronchopulmonary Dysplasia by Ambalavanan, Namasivayam, MD, Cotten, C. Michael, MD, Page, Grier P., PhD, Carlo, Waldemar A., MD, Murray, Jeffrey C., MD, Bhattacharya, Soumyaroop, MS, MEd, Mariani, Thomas J., PhD, Cuna, Alain C., MD, Faye-Petersen, Ona M., MD, Kelly, David, MD, Higgins, Rosemary D., MD

“…Objective To identify single-nucleotide polymorphisms (SNPs) and pathways associated with bronchopulmonary dysplasia (BPD) because O2 requirement at 36 weeks'…”
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A novel in vitro model of primary human pediatric lung epithelial cells by Wang, Qian, Bhattacharya, Soumyaroop, Mereness, Jared A., Anderson, Christopher, Lillis, Jacquelyn A., Misra, Ravi S., Romas, Stephen, Huyck, Heidie, Howell, Amanda, Bandyopadhyay, Gautam, Donlon, Kathy, Myers, Jason R., Ashton, John, Pryhuber, Gloria S., Mariani, Thomas J.

“…Background Current in vitro human lung epithelial cell models derived from adult tissues may not accurately represent all attributes that define homeostatic…”
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Transcriptomic Biomarkers to Discriminate Bacterial from Nonbacterial Infection in Adults Hospitalized with Respiratory Illness by Bhattacharya, Soumyaroop, Rosenberg, Alex F., Peterson, Derick R., Grzesik, Katherine, Baran, Andrea M., Ashton, John M., Gill, Steven R., Corbett, Anthony M., Holden-Wiltse, Jeanne, Topham, David J., Walsh, Edward E., Mariani, Thomas J., Falsey, Ann R.

“…Lower respiratory tract infection (LRTI) commonly causes hospitalization in adults. Because bacterial diagnostic tests are not accurate, antibiotics are…”
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Genome-Wide Transcriptional Profiling Reveals Connective Tissue Mast Cell Accumulation in Bronchopulmonary Dysplasia by BHATTACHARYA, Soumyaroop, GO, Diana, PRYHUBER, Gloria S, KRENITSKY, Daria L, HUYCK, Heidi L, KUMAR SOLLETI, Siva, LUNGER, Valerie A, METLAY, Leon, SRISUMA, Sorachai, WERT, Susan E, MARIANI, Thomas J

“…Bronchopulmonary dysplasia (BPD) is a major complication of premature birth. Risk factors for BPD are complex and include prenatal infection and O(2) toxicity…”
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Mammalian D-Cysteine controls insulin secretion in the pancreas by Roychaudhuri, Robin, West, Timothy, Bhattacharya, Soumyaroop, Saavedra, Harry G., Lee, Hangnoh, Albacarys, Lauren, Gadalla, Moataz M., Amzel, Mario, Yang, Peixin, Snyder, Solomon H.

“…D-amino acids are being recognized as important molecules in mammals with function. This is a first identification of endogenous D-cysteine in mammalian…”
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Lymphocyte-Specific Biomarkers Associated With Preterm Birth and Bronchopulmonary Dysplasia by Bhattacharya, Soumyaroop, Mereness, Jared A, Baran, Andrea M, Misra, Ravi S, Peterson, Derick R, Ryan, Rita M, Reynolds, Anne Marie, Pryhuber, Gloria S, Mariani, Thomas J

“…Many premature babies who are born with neonatal respiratory distress syndrome (RDS) go on to develop Bronchopulmonary Dysplasia (BPD) and later…”
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Integration of Genomic and Genetic Approaches Implicates IREB2 as a COPD Susceptibility Gene by DeMeo, Dawn L., Mariani, Thomas, Bhattacharya, Soumyaroop, Srisuma, Sorachai, Lange, Christoph, Litonjua, Augusto, Bueno, Raphael, Pillai, Sreekumar G., Lomas, David A., Sparrow, David, Shapiro, Steven D., Criner, Gerard J., Kim, Hong P., Chen, Zhihua, Choi, Augustine M.K., Reilly, John, Silverman, Edwin K.

“…Chronic obstructive pulmonary disease (COPD) is the fourth leading cause of death worldwide and is influenced by both genetic determinants and smoking. We…”
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Fibroblast growth factor receptors control epithelial-mesenchymal interactions necessary for alveolar elastogenesis by Srisuma, Sorachai, Bhattacharya, Soumyaroop, Simon, Dawn M, Solleti, Siva K, Tyagi, Shivraj, Starcher, Barry, Mariani, Thomas J

“…The mechanisms contributing to alveolar formation are poorly understood. A better understanding of these processes will improve efforts to ameliorate lung…”
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Molecular Biomarkers for Quantitative and Discrete COPD Phenotypes by Bhattacharya, Soumyaroop, Srisuma, Sorachai, DeMeo, Dawn L, Shapiro, Steven D, Bueno, Raphael, Silverman, Edwin K, Reilly, John J, Mariani, Thomas J

“…Chronic obstructive pulmonary disease (COPD) is an inflammatory lung disorder with complex pathological features and largely unknown etiology. The…”
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Array of hope: expression profiling identifies disease biomarkers and mechanism by Bhattacharya, Soumyaroop, Mariani, Thomas J

“…High-throughput, genome-wide analytical technologies are now commonly used in all fields of medical research. The most commonly applied of these technologies,…”
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Transcriptional Regulation on Aneuploid Chromosomes in Diverse Candida albicans Mutants by Tucker, Christopher, Bhattacharya, Soumyaroop, Wakabayashi, Hironao, Bellaousov, Stanislav, Kravets, Anatoliy, Welle, Stephen L., Myers, Jason, Hayes, Jeffrey J., Bulger, Michael, Rustchenko, Elena

“…Candida albicans is a diploid fungus and a predominant opportunistic human pathogen. Notably, C. albicans employs reversible chromosomal aneuploidies as a…”
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Gene expression profiling of Epstein-Barr virus-positive and -negative monomorphic B-cell posttransplant lymphoproliferative disorders by Craig, Fiona E, Johnson, Lawrence R, Harvey, Stephen A K, Nalesnik, Michael A, Luo, Jianhua H, Bhattacharya, Soumyaroop D, Swerdlow, Steven H

“…Although most posttransplant lymphoproliferative disorders (PTLD) are related to Epstein-Barr virus (EBV) infection, approximately 20% lack detectable EBV…”
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A classification-based machine learning approach for the analysis of genome-wide expression data by Lyons-Weiler, James, Patel, Satish, Bhattacharya, Soumyaroop

“…Three important areas of data analysis for global gene expression analysis are class discovery, class prediction, and finding dysregulated genes (biomarkers)…”
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Platform dependence of inference on gene-wise and gene-set involvement in human lung development by Du, Rose, Tantisira, Kelan, Carey, Vincent, Bhattacharya, Soumyaroop, Metje, Stephanie, Kho, Alvin T, Klanderman, Barbara J, Gaedigk, Roger, Lazarus, Ross, Mariani, Thomas J, Leeder, J Steven, Weiss, Scott T

“…With the recent development of microarray technologies, the comparability of gene expression data obtained from different platforms poses an important problem…”
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Transcriptional characterisation of human lung cells identifies novel mesenchymal lineage markers by Danopoulos, Soula, Bhattacharya, Soumyaroop, Mariani, Thomas J, Al Alam, Denise

“…The lung mesenchyme gives rise to multiple distinct lineages of cells in the mature respiratory system, including smooth muscle cells of the airway and…”
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