Search Results - "Aykul, Senem"
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Determination of half-maximal inhibitory concentration using biosensor-based protein interaction analysis
Published in Analytical biochemistry (01-09-2016)“…Half-maximal inhibitory concentration (IC50) is the most widely used and informative measure of a drug's efficacy. It indicates how much drug is needed to…”
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BMP-4 Extraction from Extracellular Matrix and Analysis of Heparin-Binding Properties
Published in Molecular biotechnology (01-02-2022)“…Recombinant human BMP-4 growth factor (GF) has significant commercial potential as therapeutic for regenerating bone and as cell culture supplement. However,…”
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3
Activin A forms a non-signaling complex with ACVR1 and type II Activin/BMP receptors via its finger 2 tip loop
Published in eLife (09-06-2020)“…Activin A functions in BMP signaling in two ways: it either engages ACVR1B to activate Smad2/3 signaling or binds ACVR1 to form a non-signaling complex (NSC)…”
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4
Smad2/3 Activation Regulates Smad1/5/8 Signaling via a Negative Feedback Loop to Inhibit 3T3-L1 Adipogenesis
Published in International journal of molecular sciences (06-08-2021)“…Adipose tissues (AT) expand in response to energy surplus through adipocyte hypertrophy and hyperplasia. The latter, also known as adipogenesis, is a process…”
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5
Human Cerberus prevents nodal-receptor binding, inhibits nodal signaling, and suppresses nodal-mediated phenotypes
Published in PloS one (20-01-2015)“…The Transforming Growth Factor-ß (TGFß) family ligand Nodal is an essential embryonic morphogen that is associated with progression of breast and other…”
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Anti-ACVR1 antibodies exacerbate heterotopic ossification in fibrodysplasia ossificans progressiva (FOP) by activating FOP-mutant ACVR1
Published in The Journal of clinical investigation (15-06-2022)“…Fibrodysplasia ossificans progressiva (FOP) is a rare genetic disorder whose most debilitating pathology is progressive and cumulative heterotopic ossification…”
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Structural basis for potency differences between GDF8 and GDF11
Published in BMC biology (03-03-2017)“…Growth/differentiation factor 8 (GDF8) and GDF11 are two highly similar members of the transforming growth factor β (TGFβ) family. While GDF8 has been…”
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How Activin A Became a Therapeutic Target in Fibrodysplasia Ossificans Progressiva
Published in Biomolecules (Basel, Switzerland) (01-01-2024)“…Fibrodysplasia ossificans progressiva (FOP) is a rare genetic disorder characterized by episodic yet cumulative heterotopic ossification (HO) of skeletal…”
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Substitutions of Conserved Residues in the C-terminal Region of DnaC Cause Thermolability in Helicase Loading
Published in The Journal of biological chemistry (26-02-2016)“…The DnaB-DnaC complex binds to the unwound DNA within the Escherichia coli replication origin in the helicase loading process, but the biochemical events that…”
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Transforming Growth Factor-β Family Ligands Can Function as Antagonists by Competing for Type II Receptor Binding
Published in The Journal of biological chemistry (13-05-2016)“…Transforming growth factor-β (TGF-β) family ligands are pleiotropic cytokines. Their physiological activities are not determined by a simple coupling of…”
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New Ligand Binding Function of Human Cerberus and Role of Proteolytic Processing in Regulating Ligand–Receptor Interactions and Antagonist Activity
Published in Journal of molecular biology (13-02-2016)“…Cerberus is a key regulator of vertebrate embryogenesis. Its biological function has been studied extensively in frog and mouse embryos. Its ability to bind…”
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12
High-Throughput, Biosensor-Based Approach to Examine Bone Morphogenetic Protein (BMP)-Receptor Interactions
Published in Methods in molecular biology (Clifton, N.J.) (2019)“…Binding of a BMP to its cognate cell surface receptors is the initiating step in the BMP signaling cascade. Thus, knowing which BMP-receptor complexes form is…”
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13
Biochemical and Cellular Analysis Reveals Ligand Binding Specificities, a Molecular Basis for Ligand Recognition, and Membrane Association-dependent Activities of Cripto-1 and Cryptic
Published in The Journal of biological chemistry (10-03-2017)“…Transforming growth factor β (TGF-β) pathways are key determinants of cell fate in animals. Their basic mechanism of action is simple. However, to produce…”
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14
Activin E-ACVR1C cross talk controls energy storage via suppression of adipose lipolysis in mice
Published in Proceedings of the National Academy of Sciences - PNAS (08-08-2023)“…Body fat distribution is a heritable risk factor for cardiovascular and metabolic disease. In humans, rare Inhibin beta E ( , activin E) loss-of-function…”
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15
Anti-ACVRI antibodies exacerbate heterotopic ossification in fibrodysplasia ossificans progressive
Published in The Journal of clinical investigation (15-06-2022)“…Fibrodysplasia ossificans progressiva (FOP) is a rare genetic disorder whose most debilitating pathology is progressive and cumulative heterotopic ossification…”
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Journal Article -
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Anti-ACVRI antibodies exacerbate heterotopic ossification in fibrodysplasia ossificans progressive by activating FOP-mutant ACVR1
Published in The Journal of clinical investigation (15-06-2022)“…Fibrodysplasia ossificans progressiva (FOP) is a rare genetic disorder whose most debilitating pathology is progressive and cumulative heterotopic ossification…”
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Journal Article -
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Dissecting the Extracellular Mechanisms of Nodal and Activin Signaling Regulation
Published 2017“…Transforming Growth Factor-beta (TGF-beta) family ligands are key regulators of multiple cellular processes including cell proliferation, differentiation, and…”
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Dissertation