Search Results - "Athey, B. D."

Stress and glucocorticoid receptor transcriptional programming in time and space: Implications for the brain–gut axis by Wiley, J. W., Higgins, G. A., Athey, B. D.

“…Background Chronic psychological stress is associated with enhanced abdominal pain and altered intestinal barrier function that may result from a perturbation…”
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Needs for an Expanded Ontology-Based Classification of Adverse Drug Reactions and Related Mechanisms by Zhichkin, P E, Athey, B D, Avigan, M I, Abernethy, D R

“…The growing significance of bioinformatics and systems biology in drug safety research requires a system of adverse‐event classification that goes beyond a…”
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F-actin, tubulin and spectrin in the organ of Corti: comparative distribution in different cell types and mammalian species by Raphael, Y, Athey, B D, Wang, Y, Lee, M K, Altschuler, R A

“…Laser scanning confocal microscopy was used to determine the distribution of actin, spectrin and tubulin in whole mounts of the organ of Corti of guinea pig,…”
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Guidelines for incorporating non‐perfectly matched oligonucleotides into target‐specific hybridization probes for a DNA microarray by Lee, Inhan, Dombkowski, Alan A., Athey, Brian D.

“…Sequence‐specific oligonucleotide probes play a crucial role in hybridization techniques including PCR, DNA microarray and RNA interference. Once the entire…”
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Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length by Williams, S.P., Athey, B.D., Muglia, L.J., Schappe, R.S., Gough, A.H., Langmore, J.P.

“…Four classes of models have been proposed for the internal structure of eukaryotic chromosome fibers--the solenoid, twisted-ribbon, crossed-linker, and…”
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Radial Density Distribution of Chromatin: Evidence That Chromatin Fibers Have Solid Centers by Smith, Michael F., Athey, Brian D., Williams, Shawn P., Langmore, John P.

“…Fiber diameter, radial distribution of density, and radius of gyration were determined from scanning transmission electron microscopy (STEM) of unstained,…”
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Challenges in presenting high dimensional data to aid in triage in the DARPA virtual soldier project by Boyd, A D, Wright, Z C, Ade, A S, Bookstein, F, Ogden, J C, Meixner, W, Athey, B D, Morris, T

“…One of the goals of the DARPA Virtual Soldier Project is to aid the field medic in the triage of a casualty. In Phase I, we are currently collecting 12…”
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The Diameters of Frozen-Hydrated Chromatin Fibers Increase with DNA Linker Length: Evidence in Support of Variable Diameter Models for Chromatin by Athey, Brian D., Smith, Michael F., Rankert, Debby A., Williams, Shawn P., Langmore, John P.

“…The diameters of chromatin fibers from Thyone briareus (sea cucumber) sperm (DNA linker length, n = 87 bp) and Necturus maculosus (mud-puppy) erythrocytes (n =…”
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The University of Michigan Honest Broker: A Web-based Service for Clinical and Translational Research and Practice by Boyd, Andrew D., Saxman, Paul R., Hunscher, Dale A., Smith, Kevin A., Morris, Timothy D., Kaston, Michelle, Bayoff, Frederick, Rogers, Bruce, Hayes, Pamela, Rajeev, Namrata, Kline-Rogers, Eva, Eagle, Kim, Clauw, Daniel, Greden, John F., Green, Lee A., Athey, Brian D.

“…For the success of clinical and translational science, a seamless interoperation is required between clinical and research information technology. Addressing…”
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Structural Molecular Dynamics Studies on Polyamidoamine Dendrimers for a Therapeutic Application:  Effects of pH and Generation by Lee, Inhan, Athey, Brian D, Wetzel, Arthur W, Meixner, Walter, Baker, James R

“…Extensive simulations of PAMAM dendrimer generation 2 were performed at several pH conditions with explicit water molecules, to obtain proper conditions and…”
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The end-to-end performance effects of parallel TCP sockets on a lossy wide-area network by Hacker, T. J., Athey, B. D., Noble, B.

“…This paper examines the effects of using parallel TCP flows to improve end-to-end network performance for distributed data intensive applications. A series of…”
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miBLAST: scalable evaluation of a batch of nucleotide sequence queries with BLAST by Kim, You Jung, Boyd, Andrew, Athey, Brian D., Patel, Jignesh M.

“…A common task in many modern bioinformatics applications is to match a set of nucleotide query sequences against a large sequence dataset. Exis-ting tools,…”
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Improving throughput and maintaining fairness using parallel TCP by Hacker, T.J., Noble, B.D., Athey, B.D.

“…Applications that require good network performance often use parallel TCP streams and TCP modifications to improve the effectiveness of TCP. If the network…”
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Adaptive data block scheduling for parallel TCP streams by Hacker, T.J., Noble, B.D., Athey, B.D.

“…Applications that use parallel TCP streams to increase throughput must multiplex and demultiplex data blocks over a set of TCP streams transmitting on one or…”
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Integrative Biomedical Informatics by Athey, B.D.

“…The National Center for Integrative Biomedical Informatics (NCIBI) is one of seven National Centers for Biomedical Computing in the NIH Roadmap. NCIBI is based…”
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The diameters of frozen-hydrated chromatin fibers increase with DNA linker length : evidence in support of variable diameter models for chromation by ATHEY, B. D, SMITH, M. F, RANKERT, D. A, WILLIAMS, S. P, LANGMORE, J. P

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Structure of the reticular lamina and repair after noise injury by Raphael, Y, Athey, B D, Wang, Y, Hawkins, Jr, J E

“…Laser Scanning Confocal Microscopy (LSCM) and specific labeling techniques were employed to examine the distributing of F-actin and microtubules in the…”
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Walden: A Scalable Solution for Grid Account Management by Kirschner, Beth A., Hacker, Thomas J., Adamson, William A., Athey, Brian D.

“…A large and diverse consortium of grid clusters, as can be found in a university setting, requires a flexible authorization model that is scalable, extensible…”
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Chromatin fibers are left-handed double helices with diameter and mass per unit length that depend on linker length by Williams, S P, Athey, B D, Muglia, L J, Schappe, R S, Gough, AH, Langmore, J P

“…Four classes models have been proposed for the internal structure of eukaryotic chromosome fibers - the solenoid, twisted-ribbon, crossed-linker, and superbead…”
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Correlations among angular wave component amplitudes in elastic multiple-scattering random media by Hoover, Brian G, Deslauriers, Louis, Grannell, Shawn M, Ahmed, Rizwan E, Dilworth, David S, Athey, Brian D, Leith, Emmett N

“…The propagation of scalar waves through random media that provide multiple elastic scattering is considered by derivation of an expression for the angular…”
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