Search Results - "Atauri Carulla, Ramón de"

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  1. 1

    From correlation to causation: analysis of metabolomics data using systems biology approaches by Rosato, Antonio, Tenori, Leonardo, Cascante, Marta, De Atauri Carulla, Pedro Ramon, Martins dos Santos, Vitor A. P., Saccenti, Edoardo

    Published in Metabolomics (2018)
    “…Introduction Metabolomics is a well-established tool in systems biology, especially in the top–down approach. Metabolomics experiments often results in…”
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    Journal Article
  2. 2

    Oncogenic regulation of tumor metabolic reprogramming by Tarrado-Castellarnau, Míriam, de Atauri, Pedro, Cascante, Marta

    Published in Oncotarget (20-09-2016)
    “…Development of malignancy is accompanied by a complete metabolic reprogramming closely related to the acquisition of most of cancer hallmarks. In fact, key…”
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  3. 3

    De novo MYC addiction as an adaptive response of cancer cells to CDK4/6 inhibition by Tarrado‐Castellarnau, Míriam, de Atauri, Pedro, Tarragó‐Celada, Josep, Perarnau, Jordi, Yuneva, Mariia, Thomson, Timothy M, Cascante, Marta

    Published in Molecular systems biology (04-10-2017)
    “…Cyclin‐dependent kinases (CDK) are rational cancer therapeutic targets fraught with the development of acquired resistance by tumor cells. Through metabolic…”
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  4. 4

    Sampling with poling-based flux balance analysis: optimal versus sub-optimal flux space analysis of Actinobacillus succinogenes by Binns, Michael, de Atauri, Pedro, Vlysidis, Anestis, Cascante, Marta, Theodoropoulos, Constantinos

    Published in BMC bioinformatics (18-02-2015)
    “…Flux balance analysis is traditionally implemented to identify the maximum theoretical flux for some specified reaction and a single distribution of flux…”
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  5. 5

    Sampling with poling-based flux balance analysis: optimal versus sub-optimal flux space analysis of Actinobacillus succinogenes by Binns, Michael, Atauri Carulla, Ramón de, Vlysidis, Anestis, Cascante i Serratosa, Marta, Theodoropoulos, Constantinos

    Published in BMC bioinformatics (18-02-2015)
    “…Flux balance analysis is traditionally implemented to identify the maximum theoretical flux for some specified reaction and a single distribution of flux…”
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    Journal Article
  6. 6

    Untargeted metabolomics reveals distinct metabolic reprogramming in endothelial cells co-cultured with CSC and non-CSC prostate cancer cell subpopulations by Jayaraman, Anusha, Kumar, Praveen, Marin, Silvia, de Atauri, Pedro, Mateo, Francesca, M Thomson, Timothy, J Centelles, Josep, F Graham, Stewart, Cascante, Marta

    Published in PloS one (21-02-2018)
    “…Tumour angiogenesis is an important hallmark of cancer and the study of its metabolic adaptations, downstream to any cellular change, can reveal attractive…”
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  7. 7

    Network modules uncover mechanisms of skeletal muscle dysfunction in COPD patients by Tényi, Ákos, Cano Franco, Isaac, Marabita, Francesco, Kiani, Narsis, Kalko, Susana, Barreiro, Esther, Atauri Carulla, Ramón de, Cascante i Serratosa, Marta, Gomez Cabrero, David, Roca Torrent, Josep

    Published in Journal of translational medicine (20-02-2018)
    “…BACKGROUND: Chronic obstructive pulmonary disease (COPD) patients often show skeletal muscle dysfunction that has a prominent negative impact on prognosis. The…”
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  8. 8

    Network modules uncover mechanisms of skeletal muscle dysfunction in COPD patients by Tényi, Ákos, Cano Franco, Isaac, Marabita, Francesco, Kiani, Narsis, Kalko, Susana, Barreiro, Esther, Atauri Carulla, Ramón de, Cascante i Serratosa, Marta, Gomez Cabrero, David, Roca Torrent, Josep

    Published in Journal of translational medicine (20-02-2018)
    “…BACKGROUND: Chronic obstructive pulmonary disease (COPD) patients often show skeletal muscle dysfunction that has a prominent negative impact on prognosis. The…”
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    Journal Article
  9. 9

    Effects of cadmium and mercury on the upper part of skeletal muscle glycolysis in mice by Ramírez-Bajo, Maria José, de Atauri, Pedro, Ortega, Fernando, Westerhoff, Hans V, Gelpí, Josep Lluis, Centelles, Josep J, Cascante, Marta

    Published in PloS one (28-01-2014)
    “…The effects of pre-incubation with mercury (Hg(2+)) and cadmium (Cd(2+)) on the activities of individual glycolytic enzymes, on the flux and on internal…”
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  10. 10

    HepatoDyn: A Dynamic Model of Hepatocyte Metabolism That Integrates 13C Isotopomer Data by Foguet, Carles, Marin, Silvia, Selivanov, Vitaly A, Fanchon, Eric, Lee, Wai-Nang Paul, Guinovart, Joan J, de Atauri, Pedro, Cascante, Marta

    Published in PLoS computational biology (28-04-2016)
    “…The liver performs many essential metabolic functions, which can be studied using computational models of hepatocytes. Here we present HepatoDyn, a highly…”
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  11. 11

    ChainRank, a chain prioritisation method for contextualisation of biological networks by Tényi, Ákos, de Atauri, Pedro, Gomez-Cabrero, David, Cano, Isaac, Clarke, Kim, Falciani, Francesco, Cascante, Marta, Roca, Josep, Maier, Dieter

    Published in BMC bioinformatics (05-01-2016)
    “…Advances in high throughput technologies and growth of biomedical knowledge have contributed to an exponential increase in associative data. These data can be…”
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  12. 12
  13. 13

    Workforce preparation: the Biohealth computing model for Master and PhD students by Cascante, Marta, de Atauri, Pedro, Gomez-Cabrero, David, Wagner, Peter, Centelles, Josep J, Marin, Silvia, Cano, Isaac, Velickovski, Filip, Marin de Mas, Igor, Maier, Dieter, Roca, Josep, Sabatier, Philippe

    Published in Journal of translational medicine (28-11-2014)
    “…The article addresses the strategic role of workforce preparation in the process of adoption of Systems Medicine as a driver of biomedical research in the new…”
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