Search Results - "Arvaniti, Eirini"

Sensitive detection of rare disease-associated cell subsets via representation learning by Arvaniti, Eirini, Claassen, Manfred

“…Rare cell populations play a pivotal role in the initiation and progression of diseases such as cancer. However, the identification of such subpopulations…”
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Automated Gleason grading of prostate cancer tissue microarrays via deep learning by Arvaniti, Eirini, Fricker, Kim S., Moret, Michael, Rupp, Niels, Hermanns, Thomas, Fankhauser, Christian, Wey, Norbert, Wild, Peter J., Rüschoff, Jan H., Claassen, Manfred

“…The Gleason grading system remains the most powerful prognostic predictor for patients with prostate cancer since the 1960s. Its application requires…”
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Author Correction: Automated Gleason grading of prostate cancer tissue microarrays via deep learning by Arvaniti, Eirini, Fricker, Kim S., Moret, Michael, Rupp, Niels, Hermanns, Thomas, Fankhauser, Christian, Wey, Norbert, Wild, Peter J., Rüschoff, Jan H., Claassen, Manfred

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Similarities and Differences of Blood N-Glycoproteins in Five Solid Carcinomas at Localized Clinical Stage Analyzed by SWATH-MS by Sajic, Tatjana, Liu, Yansheng, Arvaniti, Eirini, Surinova, Silvia, Williams, Evan G., Schiess, Ralph, Hüttenhain, Ruth, Sethi, Atul, Pan, Sheng, Brentnall, Teresa A., Chen, Ru, Blattmann, Peter, Friedrich, Betty, Niméus, Emma, Malander, Susanne, Omlin, Aurelius, Gillessen, Silke, Claassen, Manfred, Aebersold, Ruedi

“…Cancer is mostly incurable when diagnosed at a metastatic stage, making its early detection via blood proteins of immense clinical interest. Proteomic changes…”
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Author Correction: Automated Gleason grading of prostate cancer tissue microarrays via deep learning by Arvaniti, Eirini, Fricker, Kim S., Moret, Michael, Rupp, Niels, Hermanns, Thomas, Fankhauser, Christian, Wey, Norbert, Wild, Peter J., Rüschoff, Jan H., Claassen, Manfred

“…A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper…”
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Identification of ALP+/CD73+ defining markers for enhanced osteogenic potential in human adipose-derived mesenchymal stromal cells by mass cytometry by Canepa, Daisy D, Casanova, Elisa A, Arvaniti, Eirini, Tosevski, Vinko, Märsmann, Sonja, Eggerschwiler, Benjamin, Halvachizadeh, Sascha, Buschmann, Johanna, Barth, André A, Plock, Jan A, Claassen, Manfred, Pape, Hans-Christoph, Cinelli, Paolo

“…The impressive progress in the field of stem cell research in the past decades has provided the ground for the development of cell-based therapy. Mesenchymal…”
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Accurate structure prediction of biomolecular interactions with AlphaFold 3 by Abramson, Josh, Adler, Jonas, Dunger, Jack, Evans, Richard, Green, Tim, Pritzel, Alexander, Ronneberger, Olaf, Willmore, Lindsay, Ballard, Andrew J., Bambrick, Joshua, Bodenstein, Sebastian W., Evans, David A., Hung, Chia-Chun, O’Neill, Michael, Reiman, David, Tunyasuvunakool, Kathryn, Wu, Zachary, Žemgulytė, Akvilė, Arvaniti, Eirini, Beattie, Charles, Bertolli, Ottavia, Bridgland, Alex, Cherepanov, Alexey, Congreve, Miles, Cowen-Rivers, Alexander I., Cowie, Andrew, Figurnov, Michael, Fuchs, Fabian B., Gladman, Hannah, Jain, Rishub, Khan, Yousuf A., Low, Caroline M. R., Perlin, Kuba, Potapenko, Anna, Savy, Pascal, Singh, Sukhdeep, Stecula, Adrian, Thillaisundaram, Ashok, Tong, Catherine, Yakneen, Sergei, Zhong, Ellen D., Zielinski, Michal, Žídek, Augustin, Bapst, Victor, Kohli, Pushmeet, Jaderberg, Max, Hassabis, Demis, Jumper, John M.

“…The introduction of AlphaFold 2 1 has spurred a revolution in modelling the structure of proteins and their interactions, enabling a huge range of applications…”
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GM-CSF and CXCR4 define a T helper cell signature in multiple sclerosis by Galli, Edoardo, Hartmann, Felix J., Schreiner, Bettina, Ingelfinger, Florian, Arvaniti, Eirini, Diebold, Martin, Mrdjen, Dunja, van der Meer, Franziska, Krieg, Carsten, Nimer, Faiez Al, Sanderson, Nicholas, Stadelmann, Christine, Khademi, Mohsen, Piehl, Fredrik, Claassen, Manfred, Derfuss, Tobias, Olsson, Tomas, Becher, Burkhard

“…Cytokine dysregulation is a central driver of chronic inflammatory diseases such as multiple sclerosis (MS). Here, we sought to determine the characteristic…”
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Polarizable coarse-grained models for molecular dynamics simulation of liquid cyclohexane by Szklarczyk, Oliwia M., Arvaniti, Eirini, van Gunsteren, Wilfred F.

“…Force field parameters for polarizable coarse‐grained (CG) supra‐atomic models of liquid cyclohexane are proposed. Two different bead sizes were investigated,…”
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Coupling weak and strong supervision for classification of prostate cancer histopathology images by Arvaniti, Eirini, Claassen, Manfred

“…Automated grading of prostate cancer histopathology images is a challenging task, with one key challenge being the scarcity of annotations down to the level of…”
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Proxy-based Zero-Shot Entity Linking by Effective Candidate Retrieval by Wiatrak, Maciej, Arvaniti, Eirini, Brayne, Angus, Vetterle, Jonas, Sim, Aaron

“…A recent advancement in the domain of biomedical Entity Linking is the development of powerful two-stage algorithms, an initial candidate retrieval stage that…”
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Markov Network Structure Learning via Ensemble-of-Forests Models by Arvaniti, Eirini, Claassen, Manfred

“…Real world systems typically feature a variety of different dependency types and topologies that complicate model selection for probabilistic graphical models…”
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