Search Results - "Apiyo, David"
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1
Role of cofactors in metalloprotein folding
Published in Quarterly reviews of biophysics (01-11-2004)“…Metals are commonly found as natural constituents of proteins. Since many such metals can interact specifically with their corresponding unfolded proteins in…”
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2
Dissecting Homo-Heptamer Thermodynamics by Isothermal Titration Calorimetry: Entropy-Driven Assembly of Co-Chaperonin Protein 10
Published in Biophysical journal (01-11-2005)“…Normally, isothermal titration calorimetry (ITC) is used to study binding reactions between two different biomolecules. Self-association processes leading to…”
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3
Molecular basis of the structural stability of a Top7-based scaffold at extreme pH and temperature conditions
Published in Journal of molecular graphics & modelling (01-06-2010)“…The development of stable biomolecular scaffolds that can tolerate environmental extremes has considerable potential for industrial and defense-related…”
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4
Immobilization strategies for single-chain antibody microarrays
Published in Proteomics (Weinheim) (01-06-2008)“…Sandwich ELISA microarrays have great potential for validating disease biomarkers. Each ELISA relies on robust-affinity reagents that retain activity when…”
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5
Engineering an ultra-stable affinity reagent based on Top7
Published in Protein engineering, design and selection (01-05-2009)“…Antibodies are widely used for diagnostic and therapeutic applications because of their sensitive and specific recognition of a wide range of targets; however,…”
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6
Unique complex between bacterial azurin and tumor-suppressor protein p53
Published in Biochemical and biophysical research communications (15-07-2005)“…The tumor-suppressor protein p53 is a major player in regulation of cell growth, genomic stability, and cell death. Recent work suggests that Pseudomonas…”
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7
Presence of the cofactor speeds up folding of Desulfovibrio desulfuricans flavodoxin
Published in Protein science (01-05-2002)“…Flavodoxin is an α/β protein with a noncovalently bound flavin‐mononucleotide (FMN) cofactor. The apo‐protein adopts a structure identical to that of the…”
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8
Solvation of the folding‐transition state in Pseudomonas aeruginosa azurin is modulated by metal
Published in Protein science (01-04-2006)“…The role of water in protein folding, specifically its presence or not in the transition‐state structure, is an unsolved question. There are two common classes…”
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9
Role of the Unique Peptide Tail in Hyperthermostable Aquifex aeolicus Cochaperonin Protein 10
Published in Biochemistry (Easton) (08-11-2005)“…All known cochaperonin protein 10 (cpn10) molecules are heptamers of seven identical subunits noncovalently linked by β-strand interactions. Cpn10 from the…”
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10
X-ray Structure of the R69D Phosphatidylinositol-Specific Phospholipase C Enzyme: Insight into the Role of Calcium and Surrounding Amino Acids in Active Site Geometry and Catalysis
Published in Biochemistry (Easton) (02-08-2005)“…Phosphatidylinositol-specific phospholipase Cs (PLCs) are a family of phosphodiesterases that catalyze the cleavage of the P−O bond via transesterification…”
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11
Solvation of the folding-transition state in Pseudomonas aeruginosa azurin is modulated by metal: Solvation of azurin's folding nucleus
Published in Protein science (01-04-2006)“…The role of water in protein folding, specifically its presence or not in the transition-state structure, is an unsolved question. There are two common classes…”
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12
Equilibrium Unfolding of Dimeric Desulfoferrodoxin Involves a Monomeric Intermediate: Iron Cofactors Dissociate after Polypeptide Unfolding
Published in Biochemistry (Easton) (24-04-2001)“…Here we report the conformational stability of homodimeric desulfoferrodoxin (dfx) from Desulfovibrio desulfuricans (ATCC 27774). The dimer is formed by two…”
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13
The role of the cofactors in folding of Desulfovibrio desulfuricans flavodoxin and desulfoferrodoxin (DFX)
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Dissertation -
14
The role of the cofactors in folding of Desulfovibrio desulfuricans flavodoxin and desulfoferrodoxin (DFX)
Published 01-01-2003“…In this thesis, the roles of the cofactors for folding and stability of flavodoxin and desulfoferredoxin proteins from Desulfovibrio desulfuricans , a…”
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Dissertation -
15
No cofactor effect on equilibrium unfolding of Desulfovibrio desulfuricans flavodoxin
Published in Biochimica et biophysica acta (15-06-2000)“…Flavodoxins are proteins with an α/β doubly wound topology that mediate electron transfer through a non-covalently bound flavin mononucleotide (FMN). The FMN…”
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