Search Results - "Altun, Ahmet"
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Local energy decomposition analysis of hydrogen-bonded dimers within a domain-based pair natural orbital coupled cluster study
Published in Beilstein journal of organic chemistry (25-04-2018)“…The local energy decomposition (LED) analysis allows for a decomposition of the accurate domain-based local pair natural orbital CCSD(T) [DLPNO-CCSD(T)] energy…”
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Extrapolation to the Limit of a Complete Pair Natural Orbital Space in Local Coupled-Cluster Calculations
Published in Journal of chemical theory and computation (13-10-2020)“…The domain-based local pair natural orbital (PNO) coupled-cluster DLPNO-CCSD(T) method allows one to perform single point energy calculations for systems with…”
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3
Correlated Ab Initio and Density Functional Studies on H2 Activation by FeO
Published in Journal of chemical theory and computation (09-09-2014)“…The reaction FeO+ + H2 → Fe+ + H2O is a simple model for hydrogen abstraction processes in biologically important heme systems. The geometries of all relevant…”
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Design, synthesis, and anticancer activity of novel 4-thiazolidinone-phenylaminopyrimidine hybrids
Published in Molecular diversity (01-05-2021)“…4-Thiazolidinones and phenylaminopyrimidines are known as anticancer agents. Imatinib is the pioneer phenylaminopyrimidine derivative kinase inhibitor, which…”
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Overcoming Drug Resistance: P-Gp Inhibitor Verapamil Enhances Temozolomide’s Antiproliferative Effect in Neuroblastoma Cells
Published in Neurochemical journal (01-03-2024)“…Neuroblastoma is one of the most common and deadly childhood solid tumors. P-glycoprotein (P-gp) pump plays a role in developing resistance to many…”
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Unveiling the complex pattern of intermolecular interactions responsible for the stability of the DNA duplex
Published in Chemical science (Cambridge) (06-10-2021)“…Herein, we provide new insights into the intermolecular interactions responsible for the intrinsic stability of the duplex structure of a large portion of…”
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Spectral Tuning in Visual Pigments: An ONIOM(QM:MM) Study on Bovine Rhodopsin and its Mutants
Published in The journal of physical chemistry. B (05-06-2008)“…We have investigated geometries and excitation energies of bovine rhodopsin and some of its mutants by hybrid quantum mechanical/molecular mechanical (QM/MM)…”
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Theoretical Perspective on the Structure and Mechanism of Cytochrome P450 Enzymes
Published in Chemical reviews (01-06-2005)“…Cytochrome 450 is one of the most versatile enzymes in nature--the area has become a very active arena of research that has led to important insights and has…”
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What is the Active Species of Cytochrome P450 during Camphor Hydroxylation? QM/MM Studies of Different Electronic States of Compound I and of Reduced and Oxidized Iron−Oxo Intermediates
Published in Journal of the American Chemical Society (25-07-2007)“…We have investigated C−H hydroxylation of camphor by Compound I (Cpd I) of cytochrome P450cam in different electronic states and by its one-electron reduced…”
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Mechanism of Spectral Tuning Going from Retinal in Vacuo to Bovine Rhodopsin and its Mutants: Multireference ab Initio Quantum Mechanics/Molecular Mechanics Studies
Published in The journal of physical chemistry. B (25-12-2008)“…We have investigated photoabsorption spectra of bovine rhodopsin and its mutants (E122Q and E113Q) by hybrid quantum mechanical/molecular mechanical (QM/MM)…”
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Can subthreshold micropulse yellow laser treatment change the anti-vascular endothelial growth factor algorithm in diabetic macular edema? A randomized clinical trial
Published in Indian journal of ophthalmology (01-01-2020)“…Purpose: To compare the efficacy of subthreshold micropulse yellow laser (SMYL) and intravitreal aflibercept injection (IAI) combination therapy with IAI…”
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A simple method for studying the molecular mechanisms of ultraviolet and violet reception in vertebrates
Published in BMC evolutionary biology (22-03-2016)“…Many vertebrate species use ultraviolet (UV) reception for such basic behaviors as foraging and mating, but many others switched to violet reception and…”
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The effect of probiotics on ıntestinal motility in an experimental short bowel model
Published in Acta cirúrgica brasileira (01-01-2020)“…Abstract Purpose To investigate the effect of probiotics on spontaneous contractions of smooth muscle isolated from jejunum and ileum of rat model. Methods…”
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14
Epistatic adaptive evolution of human color vision
Published in PLoS genetics (01-12-2014)“…Establishing genotype-phenotype relationship is the key to understand the molecular mechanism of phenotypic adaptation. This initial step may be untangled by…”
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Color Tuning in Rhodopsins: The Origin of the Spectral Shift between the Chloride-Bound and Anion-Free Forms of Halorhodopsin
Published in Journal of the American Chemical Society (28-03-2012)“…Detailed knowledge of the molecular mechanisms that control the spectral properties in the rhodopsin protein family is important for understanding the…”
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Color Tuning in Short Wavelength-Sensitive Human and Mouse Visual Pigments: Ab initio Quantum Mechanics/Molecular Mechanics Studies
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (29-10-2009)“…We have investigated the protonation state and photoabsorption spectrum of Schiff-base (SB) nitrogen bound 11-cis-retinal in human blue and mouse UV cone…”
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London Dispersion Interactions in Pnictogen Cations [ECl2]+ and [E=E]2+ (E=P, As, Sb) Supported by Anionic N‐Heterocyclic Carbenes
Published in Chemistry : a European journal (17-12-2018)“…Several pnictogen dihalide complexes of the type (WCA‐IDipp)EX2 (E=P, As, Sb; X=Cl, Br) that bear an anionic N‐heterocyclic carbene ligand with a weakly…”
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Attenuation of morphine antinociceptive tolerance by cannabinoid CB1 and CB2 receptor antagonists
Published in The journal of physiological sciences (01-09-2015)“…Cannabinoid CB1 and CB2 receptor antagonists may be useful for their potential to increase or prolong opioid analgesia while attenuating the development of…”
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Evaluation of the impact of persistent subepithelial corneal infiltrations on the visual performance and corneal optical quality after epidemic keratoconjunctivitis
Published in Acta ophthalmologica (Oxford, England) (01-06-2015)“…Purpose Aim was to measure the effect of persistent subepithelial corneal infiltrates (SEIs) after epidemic keratoconjunctivitis (EKC) on visual performance…”
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Vision Related Quality of Life in Patients with Keratoconus
Published in Journal of Ophthalmology (01-01-2014)“…Purpose. The purpose of this study is to evaluate the vision related quality of life in patients with keratoconus by using the National Eye Institute Visual…”
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