Search Results - "Alper, Pinar"

The Translational Data Catalog - discoverable biomedical datasets by Welter, Danielle, Rocca-Serra, Philippe, Grouès, Valentin, Sallam, Nirmeen, Ancien, François, Shabani, Abetare, Asariardakani, Saeideh, Alper, Pinar, Ghosh, Soumyabrata, Burdett, Tony, Sansone, Susanna-Assunta, Gu, Wei, Satagopam, Venkata

“…The discoverability of datasets resulting from the diverse range of translational and biomedical projects remains sporadic. It is especially difficult for…”
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DS-PACK: Tool assembly for the end-to-end support of controlled access human data sharing by Alper, Pinar, Dĕd, Vilém, Herzinger, Sascha, Grouès, Valentin, Peter, Sarah, Lebioda, Jacek, Ebermann, Linda, Popleteeva, Marina, Barry, Nene Djenaba, Welter, Danielle, Ghosh, Soumyabrata, Becker, Regina, Schneider, Reinhard, Gu, Wei, Trefois, Christophe, Satagopam, Venkata

“…The EU General Data Protection Regulation (GDPR) requirements have prompted a shift from centralised controlled access genome-phenome archives to federated…”
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Getting your DUCs in a row - standardising the representation of Digital Use Conditions by Jeanson, Francis, Gibson, Spencer J., Alper, Pinar, Bernier, Alexander, Woolley, J. Patrick, Mietchen, Daniel, Strug, Andrzej, Becker, Regina, Kamerling, Pim, Sanchez Gonzalez, Maria del Carmen, Mah, Nancy, Novakowski, Ann, Wilkinson, Mark D., Benhamed, Oussama Mohammed, Landi, Annalisa, Krog, Georg Philip, Müller, Heimo, Riaz, Umar, Veal, Colin, Holub, Petr, van Enckevort, Esther, Brookes, Anthony J.

“…Improving patient care and advancing scientific discovery requires responsible sharing of research data, healthcare records, biosamples, and biomedical…”
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A research data management (RDM) community for ELIXIR [version 1; peer review: awaiting peer review] by D'Anna, Flora, Jareborg, Niclas, Jetten, Mijke, Ahokas, Minna, Alper, Pinar, Andrews, Robert, Bösl, Korbinian, D'Altri, Teresa, Faria, Daniel, Fatima, Nazeefa, Fuchs, Siiri, Garrard, Clare, Gu, Wei, Heil, Katharina F., Kallberg, Yvonne, Licciulli, Flavio, Lübke, Nils-Christian, Melo, Ana M. P., Mičetić, Ivan, Oliveira, Jorge, Oulas, Anastasis, Palagi, Patricia M., Poterlowicz, Krzysztof, Perez-Sitja, Xenia, Ruch, Patrick, Sansone, Susanna-Assunta, Schnitzer, Helena, van Gelder, Celia, Vergoulis, Thanasis, Wibberg, Daniel, Wittig, Ulrike, Leskošek, Brane, Vondrasek, Jiri, Andrabi, Munazah

“…Research data management (RDM) is central to the implementation of the FAIR (Findable Accessible, Interoperable, Reusable) and Open Science principles…”
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A research data management (RDM) community for ELIXIR [version 2; peer review: 2 approved with reservations] by D'Anna, Flora, Jareborg, Niclas, Jetten, Mijke, Ahokas, Minna, Alper, Pinar, Andrews, Robert, Bösl, Korbinian, D'Altri, Teresa, Faria, Daniel, Fatima, Nazeefa, Fuchs, Siiri, Garrard, Clare, Gu, Wei, Heil, Katharina F., Kallberg, Yvonne, Licciulli, Flavio, Lübke, Nils-Christian, Melo, Ana M. P., Mičetić, Ivan, Oliveira, Jorge, Oulas, Anastasis, Palagi, Patricia M., Poterlowicz, Krzysztof, Perez-Sitja, Xenia, Ruch, Patrick, Sansone, Susanna-Assunta, Schnitzer, Helena, van Gelder, Celia, Vergoulis, Thanasis, Wibberg, Daniel, Wittig, Ulrike, Leskošek, Brane, Vondrasek, Jiri, Andrabi, Munazah

“…Research data management (RDM) is central to the implementation of the FAIR (Findable Accessible, Interoperable, Reusable) and Open Science principles…”
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GA4GH Passport standard for digital identity and access permissions by Voisin, Craig, Linden, Mikael, Dyke, Stephanie O.M., Bowers, Sarion R., Alper, Pinar, Barkley, Maxmillian P., Bernick, David, Chao, Jianpeng, Courtot, Mélanie, Jeanson, Francis, Konopko, Melissa A., Kuba, Martin, Lawson, Jonathan, Leinonen, Jaakko, Li, Stephanie, Ota Wang, Vivian, Philippakis, Anthony A., Reinold, Kathy, Rushton, Gregory A., Spalding, J. Dylan, Törnroos, Juha, Tulchinsky, Ilya, Guidry Auvil, Jaime M., Nyrönen, Tommi H.

“…The Global Alliance for Genomics and Health (GA4GH) supports international standards that enable a federated data sharing model for the research community…”
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LabelFlow Framework for Annotating Workflow Provenance by Alper, Pinar, Belhajjame, Khalid, Curcin, Vasa, Goble, Carole

“…Scientists routinely analyse and share data for others to use. Successful data (re)use relies on having metadata describing the context of analysis of data. In…”
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Mixed ligand complexes of Co(II), Ni(II) and Cu(II) with quercetin and diimine ligands: synthesis, characterization, anti-cancer and anti-oxidant activity by Mutlu Gençkal, Hasene, Erkisa, Merve, Alper, Pınar, Sahin, Saliha, Ulukaya, Engin, Ari, Ferda

“…In this work, mixed ligand complexes of Co(II) Ni(II) and Cu(II) were synthesized using quercetin and diimine (1,10-phenanthroline or 2,2′-bipyiridine)…”
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Data capture in bioinformatics: requirements and experiences with Pedro by Jameson, Daniel, Garwood, Kevin, Garwood, Chris, Booth, Tim, Alper, Pinar, Oliver, Stephen G, Paton, Norman W

“…The systematic capture of appropriately annotated experimental data is a prerequisite for most bioinformatics analyses. Data capture is required not only for…”
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Common motifs in scientific workflows: An empirical analysis by Garijo, Daniel, Alper, Pinar, Belhajjame, Khalid, Corcho, Oscar, Gil, Yolanda, Goble, Carole

“…Workflow technology continues to play an important role as a means for specifying and enacting computational experiments in modern science. Reusing and…”
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Soloxolone methyl, as a 18βH-glycyrrhetinic acid derivate, may result in endoplasmic reticulum stress to induce apoptosis in breast cancer cells by Alper, Pinar, Salomatina, Oksana V., Salakhutdinov, Nariman F., Ulukaya, Engin, Ari, Ferda

“…[Display omitted] •Soloxolone methyl was investigated on breast cancer cells.•Soloxolone methyl decreased cancer cell viability and induced apoptosis…”
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Static analysis of Taverna workflows to predict provenance patterns by Alper, Pinar, Belhajjame, Khalid, Goble, Carole A.

“…Workflows have found adoption in scientific domains particularly due to their automation and provenance features. Using workflows scientists can repeat…”
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Soloxolone methyl induces apoptosis and oxidative/ER stress in breast cancer cells and target cancer stem cell population by Ertürk, Elif, Akgün, Oğuzhan, Yildiz, Yaren, Alper Kalkan, Pınar, Salomatina, Oksana V, Salakhutdinov, Nariman F, Ulukaya, Engin, Ari, Ferda

“…One of the most prevalent malignancies in women and one of the leading causes of cancer-related death is breast cancer. There is a need for new treatment…”
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Creation of a pandemic memory by tracing COVID-19 infections and immunity in Luxembourg (CON-VINCE) by Tsurkalenko, Olena, Bulaev, Dmitry, O'Sullivan, Marc Paul, Snoeck, Chantal, Ghosh, Soumyabrata, Kolodkin, Alexey, Rommes, Basile, Gawron, Piotr, Moreno, Carlos Vega, Gomes, Clarissa P C, Kaysen, Anne, Ohnmacht, Jochen, Schröder, Valerie E, Pavelka, Lukas, Meyers, Guilherme Ramos, Pauly, Laure, Pauly, Claire, Hanff, Anne-Marie, Meyrath, Max, Leist, Anja, Sandt, Estelle, Aguayo, Gloria A, Perquin, Magali, Gantenbein, Manon, Abdelrahman, Tamir, Klucken, Jochen, Satagopam, Venkata, Hilger, Christiane, Turner, Jonathan, Vaillant, Michel, Fritz, Joëlle V, Ollert, Markus, Krüger, Rejko

“…During the COVID-19 pandemic swift implementation of research cohorts was key. While many studies focused exclusively on infected individuals, population based…”
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DAISY: A Data Information System for accountability under the General Data Protection Regulation by Becker, Regina, Alper, Pinar, Grouès, Valentin, Munoz, Sandrine, Jarosz, Yohan, Lebioda, Jacek, Rege, Kavita, Trefois, Christophe, Satagopam, Venkata, Schneider, Reinhard

“…Abstract Background The new European legislation on data protection, namely, the General Data Protection Regulation (GDPR), has introduced comprehensive…”
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Towards Harnessing Computational Workflow Provenance for Experiment Reporting by Alper, Pinar

“…We're witnessing the era of Data-Oriented Science, where investigations routinely involve computational data analysis. The research lifecycle has now become…”
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An overview of S-OGSA: A Reference Semantic Grid Architecture by Corcho, Oscar, Alper, Pinar, Kotsiopoulos, Ioannis, Missier, Paolo, Bechhofer, Sean, Goble, Carole

“…The Grid's vision, of sharing diverse resources in a flexible, coordinated and secure manner through dynamic formation and disbanding of virtual communities,…”
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G20 summit menus as a means of gastrodiplomacy: Messages to the world via menus by Demir, Mahmut, Alper, Pınar

“…This study has focused on how and for what purposes official menus are used as a means of gastrodiplomacy. The data were obtained using content analysis from…”
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Synthesis, characterization, anticancer and antioxidant activity of new nickel(II) and copper(II) flavonoid complexes by Alper, Pınar, Erkisa, Merve, Genckal, Hasene Mutlu, Sahin, Saliha, Ulukaya, Engin, Ari, Ferda

“…Flavonoids are natural products which are known to have biological activity for human health. In this study, new mixed ligand complexes of Ni(II) and Cu(II)…”
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Recycling workflows and services through discovery and reuse by Wroe, Chris, Goble, Carole, Goderis, Antoon, Lord, Phillip, Miles, Simon, Papay, Juri, Alper, Pinar, Moreau, Luc

“…Scientific workflows are becoming a valuable tool for scientists to capture and automate e‐Science procedures. Their success brings the opportunity to publish,…”
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