Search Results - "Allard, Jun F."
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Cargo navigation across 3D microtubule intersections
Published in Proceedings of the National Academy of Sciences - PNAS (16-01-2018)“…The eukaryotic cell’s microtubule cytoskeleton is a complex 3D filament network. Microtubules cross at a wide variety of separation distances and angles. Prior…”
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Mechanical Modulation of Receptor-Ligand Interactions at Cell-Cell Interfaces
Published in Biophysical journal (21-03-2012)“…Cell surface receptors have been extensively studied because they initiate and regulate signal transduction cascades leading to a variety of functional…”
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Mechanisms of self-organization of cortical microtubules in plants revealed by computational simulations
Published in Molecular biology of the cell (15-01-2010)“…Microtubules confined to the two-dimensional cortex of elongating plant cells must form a parallel yet dispersed array transverse to the elongation axis for…”
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4
Force generation by a dynamic Z-ring in Escherichia coli cell division
Published in Proceedings of the National Academy of Sciences - PNAS (06-01-2009)“…FtsZ, a bacterial homologue of tubulin, plays a central role in bacterial cell division. It is the first of many proteins recruited to the division site to…”
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5
Actin-Myosin Spatial Patterns from a Simplified Isotropic Viscoelastic Model
Published in Biophysical journal (19-08-2014)“…F-actin networks are involved in cell mechanical processes ranging from motility to endocytosis. The mesoscale architecture of assemblies of individual F-actin…”
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A CLASP-modulated cell edge barrier mechanism drives cell-wide cortical microtubule organization in Arabidopsis
Published in Nature communications (16-08-2011)“…It is well known that the parallel order of microtubules in the plant cell cortex defines the direction of cell expansion, yet it remains unclear how…”
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7
Heterocyst patterns without patterning proteins in cyanobacterial filaments
Published in Developmental biology (01-12-2007)“…We have quantitatively modeled heterocyst differentiation after fixed nitrogen step-down in the filamentous cyanobacterium Anabaena sp. PCC 7120 without…”
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A Mechanochemical Model Explains Interactions between Cortical Microtubules in Plants
Published in Biophysical journal (09-08-2010)“…Microtubules anchored to the two-dimensional cortex of plant cells collide through plus-end polymerization. Collisions can result in rapid depolymerization,…”
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Pulling helices inside bacteria: imperfect helices and rings
Published in Physical review letters (17-04-2009)“…We study steady-state configurations of intrinsically-straight elastic filaments constrained within rod-shaped bacteria that have applied forces distributed…”
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Steady-state helices of the actin homolog MreB inside bacteria: dynamics without motors
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-09-2007)“…Within individual bacteria, we combine force-dependent polymerization dynamics of individual MreB protofilaments with an elastic model of protofilament bundles…”
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11
Weighted ensemble simulation of kinetic segregation shows role of oligomers and close contacts
Published in Biophysical journal (11-02-2022)Get full text
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12
Immune Cell Triggering by Spatial Segregation Studied using Stochastic Rare Event Simulation
Published in Biophysical journal (07-02-2020)Get full text
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13
Entropic Limits of Simultaneous Binding to T Cell Receptor Disordered Domains
Published in Biophysical journal (07-02-2020)Get full text
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14
Post-Translational Modification in Microtubule Arrays Exhibits Spatial Patterns that can act as a Signal to Tightly Localize Motor-Driven Cargo
Published in Biophysical journal (16-02-2016)Get full text
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15
Zebrafish Airineme Target Search and Optimal Curvature
Published in Biophysical journal (07-02-2020)Get full text
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Molecular Motor Organization and Mobility on Cargos Can Overcome a Tradeoff between Fast Binding and Run Length
Published in Biophysical journal (07-02-2020)Get full text
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17
Zebrafish airinemes optimize between ballistic search and diffusive search
Published in Biophysical journal (11-02-2022)Get full text
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18
Estimating the bending modulus of a FtsZ bacterial-division protein filament
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-01-2012)“…FtsZ, a cytoskeletal protein homologous to tubulin, is the principle constituent of the division ring in bacterial cells. It is known to have force-generating…”
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19
Cargo Binding to Microtubules
Published in Biophysical journal (12-02-2021)Get full text
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20
Phenotyping of Phagocytosing Neutrophil Populations using Deformability Cytometry
Published in Biophysical journal (07-02-2020)Get full text
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