Search Results - "Aksenen, Cleber Furtado"
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ViralFlow: A Versatile Automated Workflow for SARS-CoV-2 Genome Assembly, Lineage Assignment, Mutations and Intrahost Variant Detection
Published in Viruses (23-01-2022)“…The COVID-19 pandemic is driven by Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) that emerged in 2019 and quickly spread worldwide. Genomic…”
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ViralFlow v1.0—a computational workflow for streamlining viral genomic surveillance
Published in NAR genomics and bioinformatics (01-06-2024)“…Abstract ViralFlow v1.0 is a computational workflow developed for viral genomic surveillance. Several key changes turned ViralFlow into a general-purpose…”
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Evolutionary deletions within the SARS-CoV-2 genome as signature trends for virus fitness and adaptation
Published in Journal of virology (23-01-2024)“…Coronaviruses are large RNA viruses that can infect and spread among humans and animals. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2),…”
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Enhancing SARS-CoV‑2 Lineage Surveillance through the Integration of a Simple and Direct qPCR-Based Protocol Adaptation with Established Machine Learning Algorithms
Published in Analytical chemistry (Washington) (19-11-2024)“…Emerging and evolving Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) lineages, adapted to changing epidemiological conditions, present…”
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