Search Results - "Ahmad, Sadeem"

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  1. 1

    An origin of the immunogenicity of in vitro transcribed RNA by Mu, Xin, Greenwald, Emily, Ahmad, Sadeem, Hur, Sun

    Published in Nucleic acids research (01-06-2018)
    “…Abstract The emergence of RNA-based therapeutics demands robust and economical methods to produce RNA with few byproducts from aberrant activity. While in…”
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    Breaching Self-Tolerance to Alu Duplex RNA Underlies MDA5-Mediated Inflammation by Ahmad, Sadeem, Mu, Xin, Yang, Fei, Greenwald, Emily, Park, Ji Woo, Jacob, Etai, Zhang, Cheng-Zhong, Hur, Sun

    Published in Cell (08-02-2018)
    “…Aberrant activation of innate immune receptors can cause a spectrum of immune disorders, such as Aicardi-Goutières syndrome (AGS). One such receptor is MDA5, a…”
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    Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases by Kato, Kazuki, Ahmad, Sadeem, Zhu, Zixiang, Young, Janet M., Mu, Xin, Park, Sehoon, Malik, Harmit S., Hur, Sun

    Published in Molecular cell (04-02-2021)
    “…RNA helicases and E3 ubiquitin ligases mediate many critical functions in cells, but their actions have largely been studied in distinct biological contexts…”
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  4. 4

    Recognition of Arabic handwritten characters using residual neural networks by al-Taani, Ahmad T., Ahmad, Sadim T.

    “…This study proposes the use of Residual Neural Networks (ResNets) to recognize Arabic offline isolated handwritten characters including Arabic digits. ResNets…”
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    Elongation Factor Tu Prevents Misediting of Gly-tRNA(Gly) Caused by the Design Behind the Chiral Proofreading Site of D-Aminoacyl-tRNA Deacylase by Routh, Satya Brata, Pawar, Komal Ishwar, Ahmad, Sadeem, Singh, Swati, Suma, Katta, Kumar, Mantu, Kuncha, Santosh Kumar, Yadav, Kranthikumar, Kruparani, Shobha P, Sankaranarayanan, Rajan

    Published in PLoS biology (01-05-2016)
    “…D-aminoacyl-tRNA deacylase (DTD) removes D-amino acids mischarged on tRNAs and is thus implicated in enforcing homochirality in proteins. Previously, we…”
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    Mechanism of chiral proofreading during translation of the genetic code by Ahmad, Sadeem, Routh, Satya Brata, Kamarthapu, Venu, Chalissery, Jisha, Muthukumar, Sowndarya, Hussain, Tanweer, Kruparani, Shobha P, Deshmukh, Mandar V, Sankaranarayanan, Rajan

    Published in eLife (03-12-2013)
    “…The biological macromolecular world is homochiral and effective enforcement and perpetuation of this homochirality is essential for cell survival. In this…”
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  9. 9

    Convolutional Neural Network Based Approval Prediction of Enhancement Reports by Cheng, Jun, Sadiq, Mazhar, Kalugina, Olga A., Nafees, Sadeem Ahmad, Umer, Qasim

    Published in IEEE access (2021)
    “…For a given software enhancement report, identifying its possible approval status could help software developers by suggesting feature enhancements to compete…”
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    Specificity and catalysis hardwired at the RNA–protein interface in a translational proofreading enzyme by Ahmad, Sadeem, Muthukumar, Sowndarya, Kuncha, Santosh Kumar, Routh, Satya Brata, Yerabham, Antony S.K., Hussain, Tanweer, Kamarthapu, Venu, Kruparani, Shobha P, Sankaranarayanan, Rajan

    Published in Nature communications (26-06-2015)
    “…Proofreading modules of aminoacyl-tRNA synthetases are responsible for enforcing a high fidelity during translation of the genetic code. They use strategically…”
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    Helicases in Antiviral Immunity: Dual Properties as Sensors and Effectors by Ahmad, Sadeem, Hur, Sun

    “…Many helicases have a unique ability to couple cognate RNA binding to ATP hydrolysis, which can induce a large conformational change that affects its…”
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  12. 12

    N6-Methyladenosine Modification Controls Circular RNA Immunity by Chen, Y. Grace, Chen, Robert, Ahmad, Sadeem, Verma, Rohit, Kasturi, Sudhir Pai, Amaya, Laura, Broughton, James P., Kim, Jeewon, Cadena, Cristhian, Pulendran, Bali, Hur, Sun, Chang, Howard Y.

    Published in Molecular cell (03-10-2019)
    “…Circular RNAs (circRNAs) are prevalent in eukaryotic cells and viral genomes. Mammalian cells possess innate immunity to detect foreign circRNAs, but the…”
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  13. 13

    Ubiquitin-Dependent and -Independent Roles of E3 Ligase RIPLET in Innate Immunity by Cadena, Cristhian, Ahmad, Sadeem, Xavier, Audrey, Willemsen, Joschka, Park, Sehoon, Park, Ji Woo, Oh, Seong-Wook, Fujita, Takashi, Hou, Fajian, Binder, Marco, Hur, Sun

    Published in Cell (16-05-2019)
    “…The conventional view posits that E3 ligases function primarily through conjugating ubiquitin (Ub) to their substrate molecules. We report here that RIPLET, an…”
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  14. 14

    ADAR1 prevents autoinflammation by suppressing spontaneous ZBP1 activation by de Reuver, Richard, Verdonck, Simon, Dierick, Evelien, Nemegeer, Josephine, Hessmann, Eline, Ahmad, Sadeem, Jans, Maude, Blancke, Gillian, Van Nieuwerburgh, Filip, Botzki, Alexander, Vereecke, Lars, van Loo, Geert, Declercq, Wim, Hur, Sun, Vandenabeele, Peter, Maelfait, Jonathan

    Published in Nature (London) (28-07-2022)
    “…The RNA-editing enzyme adenosine deaminase acting on RNA 1 (ADAR1) limits the accumulation of endogenous immunostimulatory double-stranded RNA (dsRNA) 1 . In…”
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    The Role of RNA Editing in the Immune Response by Ahmad, Sadeem, Mu, Xin, Hur, Sun

    “…The innate immune receptors in higher organisms have evolved to detect molecular signatures associated with pathogenic infection and trigger appropriate immune…”
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  16. 16

    Stress granules are shock absorbers that prevent excessive innate immune responses to dsRNA by Paget, Max, Cadena, Cristhian, Ahmad, Sadeem, Wang, Hai-Tao, Jordan, Tristan X., Kim, Ehyun, Koo, Beechui, Lyons, Shawn M., Ivanov, Pavel, tenOever, Benjamin, Mu, Xin, Hur, Sun

    Published in Molecular cell (06-04-2023)
    “…Proper defense against microbial infection depends on the controlled activation of the immune system. This is particularly important for the RIG-I-like…”
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    A Fuzzy Inference-Based Decision Support System for Disease Diagnosis by Alam, Talha Mahboob, Shaukat, Kamran, Khelifi, Adel, Aljuaid, Hanan, Shafqat, Malaika, Ahmed, Usama, Nafees, Sadeem Ahmad, Luo, Suhuai

    Published in Computer journal (18-09-2023)
    “…Abstract Disease diagnosis is an exciting task due to many associated factors. Inaccuracy in the measurement of a patient’s symptoms and the medical expert’s…”
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    Nonsegmented Negative-Sense RNA Viruses Utilize N 6 -Methyladenosine (m 6 A) as a Common Strategy To Evade Host Innate Immunity by Lu, Mijia, Xue, Miaoge, Wang, Hai-Tao, Kairis, Elizabeth L, Ahmad, Sadeem, Wei, Jiangbo, Zhang, Zijie, Liu, Qinzhe, Zhang, Yuexiu, Gao, Youling, Garcin, Dominique, Peeples, Mark E, Sharma, Amit, Hur, Sun, He, Chuan, Li, Jianrong

    Published in Journal of virology (12-04-2021)
    “…-Methyladenosine (m A) is the most abundant internal RNA modification catalyzed by host RNA methyltransferases. As obligate intracellular parasites, many…”
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    Nonsegmented Negative-Sense RNA Viruses Utilize N6-Methyladenosine (m6A) as a Common Strategy To Evade Host Innate Immunity by Lu, Mijia, Xue, Miaoge, Wang, Hai-Tao, Kairis, Elizabeth L, Ahmad, Sadeem, Wei, Jiangbo, Zhang, Zijie, Liu, Qinzhe, Zhang, Yuexiu, Gao, Youling, Garcin, Dominique, Peeples, Mark E, Sharma, Amit, Hur, Sun, He, Chuan, Li, Jianrong

    Published in Journal of virology (12-04-2021)
    “…N6-Methyladenosine (m6A) is the most abundant internal RNA modification catalyzed by host RNA methyltransferases. As obligate intracellular parasites, many…”
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    Journal Article