Search Results - "Abele, Miriam"
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Comparative Proteomics Reveals the Anaerobic Lifestyle of Meat-Spoiling Pseudomonas Species
Published in Frontiers in microbiology (06-04-2021)“…The ability of certain ( ) species to grow or persist in anoxic habitats by either denitrification, acetate fermentation, or arginine fermentation has been…”
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Impact of Modified Atmospheres on Growth and Metabolism of Meat-Spoilage Relevant Photobacterium spp. as Predicted by Comparative Proteomics
Published in Frontiers in microbiology (02-06-2022)“…Modified atmosphere packaging (MAP) is a common strategy to selectively prevent the growth of certain species of meat spoiling bacteria. This study aimed to…”
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Interactions between Transport Protein Particle (TRAPP) complexes and Rab GTPases in Arabidopsis
Published in The Plant journal : for cell and molecular biology (01-10-2019)“…Summary Transport Protein Particle II (TRAPPII) is essential for exocytosis, endocytosis, protein sorting and cytokinesis. In spite of a considerable…”
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Decrypting lysine deacetylase inhibitor action and protein modifications by dose-resolved proteomics
Published in Cell reports (Cambridge) (25-06-2024)“…Lysine deacetylase inhibitors (KDACis) are approved drugs for cutaneous T cell lymphoma (CTCL), peripheral T cell lymphoma (PTCL), and multiple myeloma, but…”
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Spotlight on alternative frame coding: Two long overlapping genes in Pseudomonas aeruginosa are translated and under purifying selection
Published in iScience (18-02-2022)“…The existence of overlapping genes (OLGs) with significant coding overlaps revolutionizes our understanding of genomic complexity. We report two exceptionally…”
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CemR atypical response regulator impacts energy conversion in Campylobacteria
Published in mSystems (20-08-2024)“…and are microaerobic food-borne human gastrointestinal pathogens that mainly cause diarrheal disease. These related species of the class face variable…”
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Bap-Independent Biofilm Formation in Staphylococcus xylosus
Published in Microorganisms (Basel) (17-12-2021)“…The biofilm associated protein (Bap) is recognised as the essential component for biofilm formation in V329 and has been predicted as important for other…”
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Abstract 1422 Merits of deep and fast proteomics for bacterial proteome profiling
Published in The Journal of biological chemistry (01-03-2024)Get full text
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Unified Workflow for the Rapid and In-Depth Characterization of Bacterial Proteomes
Published in Molecular & cellular proteomics (01-08-2023)“…Bacteria are the most abundant and diverse organisms among the kingdoms of life. Due to this excessive variance, finding a unified, comprehensive, and safe…”
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Merits of Diazirine Photo-Immobilization for Target Profiling of Natural Products and Cofactors
Published in ACS chemical biology (18-11-2022)“…Finding the targets of natural products is of key importance in both chemical biology and drug discovery, and deconvolution of cofactor interactomes…”
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Overexpression of the plastidial pseudo‐protease AtFtsHi3 enhances drought tolerance while sustaining plant growth
Published in Physiologia plantarum (01-05-2024)“…With climate change, droughts are expected to be more frequent and severe, severely impacting plant biomass and quality. Here, we show that overexpressing the…”
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Regulation of adaptive growth decisions via phosphorylation of the TRAPPII complex in Arabidopsis
Published in The Journal of cell biology (06-05-2024)“…Plants often adapt to adverse or stress conditions via differential growth. The trans-Golgi network (TGN) has been implicated in stress responses, but it is…”
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Enzyme expression kinetics by Escherichia coli during transition from rich to minimal media depends on proteome reserves
Published in Nature microbiology (01-02-2023)“…Bacterial fitness depends on adaptability to changing environments. In rich growth medium, which is replete with amino acids, Escherichia coli primarily…”
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Interactions between Transport Protein Particle (TRAPP) complexes and Rab GTP ases in Arabidopsis
Published in The Plant journal : for cell and molecular biology (01-10-2019)“…Summary Transport Protein Particle II ( TRAPPII ) is essential for exocytosis, endocytosis, protein sorting and cytokinesis. In spite of a considerable…”
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15
Privacy-Preserving Multi-Center Differential Protein Abundance Analysis with FedProt
Published 21-07-2024“…Quantitative mass spectrometry has revolutionized proteomics by enabling simultaneous quantification of thousands of proteins. Pooling patient-derived data…”
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