Search Results - "Abdo, Zaid"
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MEGARes: an antimicrobial resistance database for high throughput sequencing
Published in Nucleic acids research (04-01-2017)“…Antimicrobial resistance has become an imminent concern for public health. As methods for detection and characterization of antimicrobial resistance move from…”
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Associations between sexual habits, menstrual hygiene practices, demographics and the vaginal microbiome as revealed by Bayesian network analysis
Published in PloS one (24-01-2018)“…The vaginal microbiome plays an influential role in several disease states in reproductive age women, including bacterial vaginosis (BV). While demographic…”
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Vaginal microbiome of reproductive-age women
Published in Proceedings of the National Academy of Sciences - PNAS (15-03-2011)“…The means by which vaginal microbiomes help prevent urogenital diseases in women and maintain health are poorly understood. To gain insight into this, the…”
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Evaluation of methods for the extraction and purification of DNA from the human microbiome
Published in PloS one (23-03-2012)“…DNA extraction is an essential step in all cultivation-independent approaches to characterize microbial diversity, including that associated with the human…”
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5
Ecological drivers of African swine fever virus persistence in wild boar populations: Insight for control
Published in Ecology and evolution (01-03-2020)“…Environmental sources of infection can play a primary role in shaping epidemiological dynamics; however, the relative impact of environmental transmission on…”
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Microbiota of the seminal fluid from healthy and infertile men
Published in Fertility and sterility (01-11-2013)“…Objective To explore potential causes of male infertility by determining the composition and structure of commensal bacterial communities in seminal fluids…”
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Temporal dynamics of the human vaginal microbiota
Published in Science translational medicine (02-05-2012)“…Elucidating the factors that impinge on the stability of bacterial communities in the vagina may help in predicting the risk of diseases that affect women's…”
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8
A comparative study of the gut microbiome in Egyptian patients with Type I and Type II diabetes
Published in PloS one (09-09-2020)“…Introduction Diabetes remains a growing public health concern in Egypt, as prevalence of Type II diabetes (TIID) has nearly tripled there in the last two…”
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Transitions of foliar mycobiota community and transcriptome in response to pathogenic conifer needle interactions
Published in Scientific reports (12-05-2022)“…Profiling the host–mycobiota interactions in healthy vs. diseased forest ecosystems helps understand the dynamics of understudied yet increasingly important…”
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Characterization of the diversity and temporal stability of bacterial communities in human milk
Published in PloS one (17-06-2011)“…Recent investigations have demonstrated that human milk contains a variety of bacterial genera; however, as of yet very little work has been done to…”
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Genetic Characteristics of Salmonella Isolates Recovered From Reused Broiler Litter Over Three Successive Flocks
Published in Journal of food protection (01-03-2024)“…•Salmonella serovars differed across flocks and broiler houses.•Majority of Salmonella isolates were susceptible to all antibiotics tested.•S. Kentucky and S…”
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Maize death acids, 9-lipoxygenase–derived cyclopente(a)nones, display activity as cytotoxic phytoalexins and transcriptional mediators
Published in Proceedings of the National Academy of Sciences - PNAS (08-09-2015)“…Plant damage promotes the interaction of lipoxygenases (LOXs) with fatty acids yielding 9-hydroperoxides, 13-hydroperoxides, and complex arrays of oxylipins…”
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Impact of oral probiotic Lactobacillus acidophilus vaccine strains on the immune response and gut microbiome of mice
Published in PloS one (12-12-2019)“…The potential role of probiotic bacteria as adjuvants in vaccine trials led to their use as nonparenteral live mucosal vaccine vectors. Yet, interactions…”
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Biodiversity indices and Random Forests reveal the potential for striped skunk (Mephitis mephitis) fecal microbial communities to function as a biomarker for oral rabies vaccination
Published in PloS one (22-08-2023)“…Wildlife disease surveillance and monitoring poses unique challenges when assessing rates of population vaccination, immunity, or infection prevalence…”
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Demographic and histopathologic features of dogs with abnormally high concentrations of hepatic copper
Published in Journal of veterinary internal medicine (01-11-2022)“…Background Copper associated hepatopathy (CAH) has become an important and prevalent disease since the 1990's, coincidental with changes in copper (Cu) content…”
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Management and environmental factors influence the prevalence and abundance of food-borne pathogens and commensal bacteria in peanut hull-based broiler litter
Published in Poultry science (01-02-2023)“…In this study, we conducted a longitudinal sampling of peanut hull-based litter from a farm under a “no antibiotics ever” program. Our objective was to…”
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Differences in the composition of vaginal microbial communities found in healthy Caucasian and black women
Published in The ISME Journal (01-06-2007)“…The maintenance of a low pH in the vagina through the microbial production of lactic acid is known to be an important defense against infectious disease in…”
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Population genomic analysis of an emerging pathogen Lonsdalea quercina affecting various species of oaks in western North America
Published in Scientific reports (08-09-2023)“…Understanding processes leading to disease emergence is important for effective disease management and prevention of future epidemics. Utilizing whole genome…”
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Applications of the FIV Model to Study HIV Pathogenesis
Published in Viruses (20-04-2018)“…Feline immunodeficiency virus (FIV) is a naturally-occurring retrovirus that infects domestic and non-domestic feline species, producing progressive immune…”
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Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities
Published in Applied microbiology and biotechnology (01-09-2008)“…Terminal restriction fragment length polymorphism (T-RFLP) analysis is a popular high-throughput fingerprinting technique used to monitor changes in the…”
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