Search Results - "AUBRY, Norman"
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Compound Aggregation in Drug Discovery: Implementing a Practical NMR Assay for Medicinal Chemists
Published in Journal of medicinal chemistry (27-06-2013)“…The pharmaceutical industry has recognized that many drug-like molecules can self-aggregate in aqueous media and have physicochemical properties that skew…”
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Monitoring Drug Self-Aggregation and Potential for Promiscuity in Off-Target In Vitro Pharmacology Screens by a Practical NMR Strategy
Published in Journal of medicinal chemistry (12-09-2013)“…A simple NMR assay was applied to monitor the tendency of compounds to self-aggregate in aqueous media. The observation of unusual spectral trends as a…”
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Solution Structure of Substrate-based Ligands When Bound to Hepatitis C Virus NS3 Protease Domain
Published in The Journal of biological chemistry (25-06-1999)“…The interactions of the NS3 protease domain with inhibitors that are based on N-terminal cleavage products of peptide substrates were studied by NMR methods…”
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Characterization of the Human Cytomegalovirus Protease As an Induced-Fit Serine Protease and the Implications to the Design of Mechanism-Based Inhibitors
Published in Journal of the American Chemical Society (07-04-1999)“…The conformational properties of the N-tert-butylacetyl-l-tert-butylglycyl-l-N δ,N δ-dimethylasparagyl-l-alanyl methyl ketone (MK) 1 and its terminal…”
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Ligand Bioactive Conformation Plays a Critical Role in the Design of Drugs That Target the Hepatitis C Virus NS3 Protease
Published in Journal of medicinal chemistry (13-03-2014)“…A ligand-focused strategy employed NMR, X-ray, modeling, and medicinal chemistry to expose the critical role that bioactive conformation played in the design…”
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Determining the Predominant Conformations of Mortiamides A–D in Solution Using NMR Data and Molecular Modeling Tools
Published in ACS omega (25-07-2023)“…Macrocyclic peptidomimetics have been seriously contributing to our arsenal of drugs to combat diseases. The search for nature’s discoveries led us to…”
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Importance of Ligand Bioactive Conformation in the Discovery of Potent Indole-Diamide Inhibitors of the Hepatitis C Virus NS5B
Published in Journal of the American Chemical Society (03-11-2010)“…Significant advances have led to receptor induced-fit and conformational selection models for describing bimolecular recognition, but a more comprehensive view…”
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N- versus O-alkylation: Utilizing NMR methods to establish reliable primary structure determinations for drug discovery
Published in Bioorganic & medicinal chemistry letters (15-08-2013)“…A classic synthetic issue that remains unresolved is the reaction that involves the control of N- versus O-alkylation of ambident anions. This common chemical…”
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RCM of Tripeptide Dienes Containing a Chiral Vinylcyclopropane Moiety: Impact of Different Ru-Based Catalysts on the Stereochemical Integrity of the Macrocyclic Products
Published in Journal of organic chemistry (23-12-2005)“…Tripeptide dienes containing an (1R,2S)-vinyl aminocyclopropylcarboxylate residue were cyclized to β-strand scaffolds under ring-closing metathesis (RCM)…”
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Binding Mode Determination of Benzimidazole Inhibitors of the Hepatitis C Virus RNA Polymerase by a Structure and Dynamics Strategy
Published in Angewandte Chemie International Edition (20-08-2004)“…A novel strategy involving NMR, medicinal chemistry, and molecular modeling is described for determining the binding mode of ligands and the binding roles of…”
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Dimethylthiazolidine Carboxylic Acid as a Rigid P3 Unit in Inhibitors of Serine Proteases: Application to Two Targets
Published in Chemical biology & drug design (01-11-2009)“…Serine proteases are a very large class of enzymes, many of which represent important targets for therapeutic agents against a wide variety of disease states…”
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Quantifying trifluoroacetic acid as a counterion in drug discovery by 19F NMR and capillary electrophoresis
Published in Journal of pharmaceutical and biomedical analysis (12-03-2007)“…Drug discovery compounds are often isolated as salts of trifluoroacetate from preparative high performance liquid chromatography, which are then used for…”
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NMR line-broadening and transferred NOESY as a medicinal chemistry tool for studying inhibitors of the hepatitis C virus NS3 protease domain
Published in Bioorganic & medicinal chemistry letters (16-10-2000)“…This work describes the use of NMR as a medicinal chemistry tool for better understanding the binding characteristics of inhibitors of the HCV NS3 protease…”
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Human Cytomegalovirus Protease Complexes Its Substrate Recognition Sequences in an Extended Peptide Conformation
Published in Biochemistry (Easton) (07-07-1998)“…Substrate hydrolysis by human cytomegalovirus (HCMV) protease is essential to viral capsid assembly. The interaction of HCMV protease and the N-terminal…”
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The Conformation of a Peptidyl Methyl Ketone Inhibitor Bound to the Human Cytomegalovirus Protease
Published in Angewandte Chemie International Edition (16-10-1998)“…A weak inhibitor means faster exchange! Since the methyl ketone MK2 is a weak noncovalent peptidyl inhibitor of the human cytomegalovirus protease, exchange…”
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Binding Mode Determination of Benzimidazole Inhibitors of the Hepatitis C Virus RNA Polymerase by a Structure and Dynamics Strategy
Published in Angewandte Chemie (20-08-2004)“…Eine neuartige Strategie, die NMR‐Spektroskopie, medizinische Chemie und Molecular Modeling umfasst, diente zur Bestimmung der Bindungsweise von Liganden und…”
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Transferred 13C T 1 Relaxation at Natural Isotopic Abundance: A Practical Method for Determining Site-Specific Changes in Ligand Flexibility upon Binding to a Macromolecule
Published in Journal of the American Chemical Society (20-12-2000)“…An NMR strategy is described for measuring changes in 13C spin−lattice relaxation times (T 1) of ligand molecules, at natural isotopic abundance, upon binding…”
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