Search Results - "ALTUN, Soner"
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Antimicrobial resistance and molecular characterization of Pantoea agglomerans isolated from rainbow trout (Oncorhynchus mykiss) fry
Published in Microbial pathogenesis (01-06-2018)“…Aquaculture has become an important candidate as an animal protein source through its growth over the last decade. Based upon a report from the Food and…”
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Description of a Novel Fish Pathogen, Plesiomonas shigelloides subsp. oncorhynchi, Isolated from Rainbow Trout (Oncorhynchus mykiss): First Genome Analysis and Comparative Genomics
Published in Fishes (01-04-2023)“…Plesiomonas shigelloides is the only species in its genus and has zoonotic importance due to the serious implications resulting from the consumption of…”
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Correction: Duman et al. Description of a Novel Fish Pathogen, Plesiomonas shigelloides subsp. oncorhynchi, Isolated from Rainbow Trout (Oncorhynchus mykiss): First Genome Analysis and Comparative Genomics. Fishes 2023, 8, 179
Published in Fishes (01-08-2024)“…Text Correction [...]…”
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Molecular characterization and antimicrobial resistance profile of fecal contaminants and spoilage bacteria that emerge in rainbow trout (Oncorhynchus mykiss) farms
Published in Bioscience of Microbiota, Food and Health (01-01-2019)“…Fecal contaminants are a major public concern that directly affect human health in the fish production industry. In this study, we aimed to determine the fecal…”
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Genome analysis and antimicrobial resistance characteristics of Chryseobacterium aquaticum isolated from farmed salmonids
Published in Aquaculture (30-03-2021)“…Fish diseases caused by bacterial genera belonging to the family Flavobacteriaceae, especially Tenacibaculum, Flavobacterium, and Chryseobacterium, are…”
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Shewanella oncorhynchi sp. nov., a novel member of the genus Shewanella, isolated from Rainbow Trout (Oncorhynchus mykiss)
Published in International journal of systematic and evolutionary microbiology (01-01-2022)“…A strain, S-1 T was isolated from rainbow trout ( Oncorhynchus mykiss ) exhibiting clinical symptoms of lens atrophy, inappetence, visual impairment and growth…”
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A comprehensive perspective on a Vagococcus salmoninarum outbreak in rainbow trout broodstock
Published in Aquaculture (15-12-2021)“…Streptococcus species are of major concern for both warm-water and cold-water salmonid species, and have zoonotic importance. While Lactococcus garvieae,…”
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General Assessment of Approaches to the Identification of Aquatic Bacterial Pathogens: A Methodological Review
Published in North American journal of aquaculture (01-10-2022)“…In the evolving biosphere, pathogenic microorganisms that cause disease may undergo phenotypic changes. While some of these changes result in new variants or…”
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Phenotypic and molecular differentiation of Lactococcus garvieae and Lactococcus petauri isolated from trout
Published in Aquaculture (15-12-2023)“…Lactococcosis caused by Lactococcus garvieae leads to infective endocarditis, urinary tract infections, and peritonitis for humans and massive deaths for…”
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Genomic insight into Chryseobacterium turcicum sp. nov. and Chryseobacterium muglaense sp. nov. isolated from farmed rainbow trout in Turkey
Published in Systematic and applied microbiology (01-01-2023)“…Four strains, designated as C-2, C-17T, C-39T and Ch-15, were isolated from farmed rainbow trout samples showing clinical signs during an investigation for a…”
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Balık ve yetiştirme suyu kökenli Aeromonas izolatlarının antimikrobiyal duyarlılıklarının saptanması
Published in Veteriner Fakültesi dergisi (2017)“…Aeromonas türleri sucul ortamda yaygın olarak bulunan ve hem soğuk kanlı hayvanlarda hem de insanlar da çeşitli hastalıklara neden olabilen Gram negatif…”
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Flavobacterium bernardetii sp. nov., a possible emerging pathogen of farmed rainbow trout (Oncorhynchus mykiss) in cold water
Published in Aquaculture (15-07-2021)“…Identification of novel Flavobacterium species from fish samples has growing importance due to their notorious effects on freshwater fish species. During the…”
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The diversity of Pseudomonas species isolated from fish farms in Turkey
Published in Aquaculture (30-03-2021)“…The prevalence of Pseudomonas species in freshwater fish and water from aquaculture farms in Turkey was determined on a monthly basis, in the period covering…”
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Flavobacterium acetivorans sp. nov. and Flavobacterium galactosidilyticum sp. nov., psychrotolerant flavobacteria isolated from cultivated fish
Published in International journal of systematic and evolutionary microbiology (01-05-2024)“…Two yellow-coloured strains, F-29 and F-340 , were isolated from fish farms in Antalya and Mugla in 2015 and 2017 during surveillance studies. The 16S rRNA…”
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Comparative proteomic and genomic analysis of Lactococcus garvieae and Lactococcus petauri isolates from Turkey
Published in Aquaculture (15-02-2025)“…Piscine lactococcosis, a bacterial disease caused by Lactococcus garvieae, L. petauri and L. formosensis, induces mass mortalities in multiple farmed fish…”
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Pseudomonas piscium sp. nov., Pseudomonas pisciculturae sp. nov. , Pseudomonas mucoides sp. nov. and Pseudomonas neuropathica sp. nov. isolated from rainbow trout
Published in International journal of systematic and evolutionary microbiology (01-01-2021)“…Six Gram negative, motile bacteria were isolated from rainbow trout ( ). The 16S rRNA sequence similarity values grouped them in the (strains P49, P50 , 154a…”
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Comprehensive genome analysis of five novel flavobacteria: Flavobacterium piscisymbiosum sp. nov., Flavobacterium pisciphilum sp. nov., Flavobacterium flavipigmentatum sp. nov., Flavobacterium lipolyticum sp. nov. and Flavobacterium cupriresistens sp. nov
Published in Systematic and applied microbiology (01-07-2024)“…Eight isolates were obtained through a study on culture-dependent bacteria from fish farms and identified as members of the genus Flavobacterium based on…”
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A review of bacterial disease outbreaks in rainbow trout ( Oncorhynchus mykiss ) reported from 2010 to 2022
Published in Journal of fish diseases (15-11-2023)“…Outbreaks of bacterial infections in aquaculture have emerged as significant threats to the sustainable production of rainbow trout ( Oncorhynchus mykiss )…”
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Flavobacterium turcicum sp. nov. and Flavobacterium kayseriense sp. nov. isolated from farmed rainbow trout in Turkey
Published in Systematic and applied microbiology (01-04-2021)“…During a study on culturable microorganisms from fish farms, four yellow-pigmented gram negative, rod shaped isolates, F-47T, F-339T, F-380 and F-400, were…”
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Phylogenomic characterization of Flavobacterium psychrophilum isolates retrieved from Turkish rainbow trout farms
Published in Journal of fish diseases (22-05-2024)“…Flavobacterium psychrophilum, a devastating fish pathogen, is responsible for bacterial cold-water disease (BCWD), also known as rainbow trout fry syndrome. F…”
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