Search Results - "ABRAHAMS, L"

Cell surface protein glycosylation in cancer by Christiansen, Maja N., Chik, Jenny, Lee, Ling, Anugraham, Merrina, Abrahams, Jodie L., Packer, Nicolle H.

“…Glycosylation of proteins is one of the most important PTMs, with more than half of all human proteins estimated to be glycosylated. It is widely known that…”
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Recent advances in glycoinformatic platforms for glycomics and glycoproteomics by Abrahams, Jodie L, Taherzadeh, Ghazaleh, Jarvas, Gabor, Guttman, Andras, Zhou, Yaoqi, Campbell, Matthew P

“…•Recent advancements in glycoinformatics tools to support analysis of glycan and glycopeptide data sets are summarised.•Review summarises the growth of machine…”
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Building a PGC-LC-MS N-glycan retention library and elution mapping resource by Abrahams, Jodie L., Campbell, Matthew P., Packer, Nicolle H.

“…Porous graphitised carbon-liquid chromatography (PGC-LC) has been proven to be a powerful technique for the analysis and characterisation of complex mixtures…”
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GlycoStore: a database of retention properties for glycan analysis by Zhao, Sophie, Walsh, Ian, Abrahams, Jodie L, Royle, Louise, Nguyen-Khuong, Terry, Spencer, Daniel, Fernandes, Daryl L, Packer, Nicolle H, Rudd, Pauline M, Campbell, Matthew P

“…Abstract Summary GlycoStore is a curated chromatographic, electrophoretic and mass-spectrometry composition database of N-, O-, glycosphingolipid (GSL) glycans…”
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Fragmentation and ion mobility properties of negative ions from N-linked carbohydrates: Part 7. Reduced glycans by Harvey, David J., Abrahams, Jodie L.

“…Rationale Negative ion collision‐induced dissociation (CID) spectra of released N‐glycans provide very informative structural information relating to branching…”
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Integrated Glycoproteomics Identifies a Role of N-Glycosylation and Galectin-1 on Myogenesis and Muscle Development by Blazev, Ronnie, Ashwood, Christopher, Abrahams, Jodie L., Chung, Long H., Francis, Deanne, Yang, Pengyi, Watt, Kevin I., Qian, Hongwei, Quaife-Ryan, Gregory A., Hudson, James E., Gregorevic, Paul, Thaysen-Andersen, Morten, Parker, Benjamin L.

“…Many cell surface and secreted proteins are modified by the covalent addition of glycans that play an important role in the development of multicellular…”
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Method for milk oligosaccharide profiling by 2-aminobenzamide labeling and hydrophilic interaction chromatography by Mariño, Karina, Lane, Jonathan A, Abrahams, Jodie L, Struwe, Weston B, Harvey, David J, Marotta, Mariarosaria, Hickey, Rita M, Rudd, Pauline M

“…Although the properties of milk oligosaccharides have been of scientific interest for many years, their structural diversity presents a challenging analytical…”
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The minimum information required for a glycomics experiment (MIRAGE) project: LC guidelines by Campbell, Matthew P, Abrahams, Jodie L, Rapp, Erdmann, Struwe, Weston B, Costello, Catherine E, Novotny, Milos, Ranzinger, Rene, York, William S, Kolarich, Daniel, Rudd, Pauline M, Kettner, Carsten

“…Abstract The Minimum Information Required for a Glycomics Experiment (MIRAGE) is an initiative created by experts in the fields of glycobiology, glycoanalytics…”
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Genomics meets glycomics-the first GWAS study of human N-Glycome identifies HNF1α as a master regulator of plasma protein fucosylation by Lauc, Gordan, Essafi, Abdelkader, Huffman, Jennifer E, Hayward, Caroline, Knežević, Ana, Kattla, Jayesh J, Polašek, Ozren, Gornik, Olga, Vitart, Veronique, Abrahams, Jodie L, Pučić, Maja, Novokmet, Mislav, Redžić, Irma, Campbell, Susan, Wild, Sarah H, Borovečki, Fran, Wang, Wei, Kolčić, Ivana, Zgaga, Lina, Gyllensten, Ulf, Wilson, James F, Wright, Alan F, Hastie, Nicholas D, Campbell, Harry, Rudd, Pauline M, Rudan, Igor

“…Over half of all proteins are glycosylated, and alterations in glycosylation have been observed in numerous physiological and pathological processes. Attached…”
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N-glycolylneuraminic acid serum biomarker levels are elevated in breast cancer patients at all stages of disease by Shewell, Lucy K, Day, Christopher J, Kutasovic, Jamie R, Abrahams, Jodie L, Wang, Jing, Poole, Jessica, Niland, Colleen, Ferguson, Kaltin, Saunus, Jodi M, Lakhani, Sunil R, von Itzstein, Mark, Paton, James C, Paton, Adrienne W, Jennings, Michael P

“…Normal human tissues do not express glycans terminating with the sialic acid N-glycolylneuraminic acid (Neu5Gc), yet Neu5Gc-containing glycans have been…”
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Glycosylation status of serum in inflammatory arthritis in response to anti-TNF treatment by Collins, Emily S, Galligan, Marie C, Saldova, Radka, Adamczyk, Barbara, Abrahams, Jodie L, Campbell, Matthew P, Ng, Chin-Teck, Veale, Douglas J, Murphy, Thomas B, Rudd, Pauline M, Fitzgerald, Oliver

“…Glycosylation is the most common post-translational modification and is altered in disease. The typical glycosylation change in patients with inflammatory…”
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Essential roles for imuA' - and imuB -encoded accessory factors in DnaE2-dependent mutagenesis in Mycobacterium tuberculosis by Warner, Digby F., Ndwandwe, Duduzile E., Abrahams, Garth L., Kana, Bavesh D., Machowski, Edith E., Venclovas, Česlovas, Mizrahi, Valerie, Benkovic, Stephen J.

“…In Mycobacterium tuberculosis (Mtb), damage-induced mutagenesis is dependent on the C-family DNA polymerase, DnaE2. Included with dnaE2 in the Mtb SOS regulon…”
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VapC toxins from Mycobacterium tuberculosis are ribonucleases that differentially inhibit growth and are neutralized by cognate VapB antitoxins by Ahidjo, Bintou Ahmadou, Kuhnert, Diane, McKenzie, Joanna L, Machowski, Edith E, Gordhan, Bhavna G, Arcus, Vickery, Abrahams, Garth L, Mizrahi, Valerie

“…The chromosome of Mycobacterium tuberculosis (Mtb) encodes forty seven toxin-antitoxin modules belonging to the VapBC family. The role of these modules in the…”
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Comprehensive analysis of the N-glycan biosynthetic pathway using bioinformatics to generate UniCorn: A theoretical N-glycan structure database by Akune, Yukie, Lin, Chi-Hung, Abrahams, Jodie L., Zhang, Jingyu, Packer, Nicolle H., Aoki-Kinoshita, Kiyoko F., Campbell, Matthew P.

“…Glycan structures attached to proteins are comprised of diverse monosaccharide sequences and linkages that are produced from precursor nucleotide-sugars by a…”
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Databases and Associated Tools for Glycomics and Glycoproteomics by Lisacek, Frederique, Mariethoz, Julien, Alocci, Davide, Rudd, Pauline M, Abrahams, Jodie L, Campbell, Matthew P, Packer, Nicolle H, Ståhle, Jonas, Widmalm, Göran, Mullen, Elaine, Adamczyk, Barbara, Rojas-Macias, Miguel A, Jin, Chunsheng, Karlsson, Niclas G

“…The access to biodatabases for glycomics and glycoproteomics has proven to be essential for current glycobiological research. This chapter presents available…”
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GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination by Gotz, Lou, Abrahams, Jodie L, Mariethoz, Julien, Rudd, Pauline M, Karlsson, Niclas G, Packer, Nicolle H, Campbell, Matthew P, Lisacek, Frederique

“…Sequencing oligosaccharides by exoglycosidases, either sequentially or in an array format, is a powerful tool to unambiguously determine the structure of…”
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Manipulating cellular transport and immune responses: dynamic interactions between intracellular Salmonella enterica and its host cells by Abrahams, Garth L., Hensel, Michael

“…Summary Intracellular survival and replication within eukaryotic host cells is of central importance for the pathogenesis of infections caused by Salmonella…”
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Intracellular Salmonella enterica Redirect Exocytic Transport Processes in a Salmonella Pathogenicity Island 2‐Dependent Manner by Kuhle, Volker, Abrahams, Garth L., Hensel, Michael

“…During intracellular life, Salmonella enterica proliferate within a specialized membrane compartment, the Salmonella‐containing vacuole (SCV), and interfere…”
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Levels of specific glycans significantly distinguish lymph node-positive from lymph node-negative breast cancer patients by Pierce, Aisling, Saldova, Radka, Abd Hamid, Umi M, Abrahams, Jodie L, McDermott, Enda W, Evoy, Denis, Duffy, Michael J, Rudd, Pauline M

“…One of the most urgent requirements in breast cancer is the development of a blood-based test for early detection and prognosis. Previously published results…”
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Role of the DinB Homologs Rv1537 and Rv3056 in Mycobacterium tuberculosis by KANA, Bavesh D, ABRAHAMS, Garth L, MIZRAHI, Valerie, SUNG, Nackmoon, WARNER, Digby F, GORDHAN, Bhavna G, MACHOWSKI, Edith E, TSENOVA, Liana, SACCHETTINI, James C, STOKER, Neil G, KAPLAN, Gilla

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