Search Results - "Çelen, Irem"

Effects of liquid cultivation on gene expression and phenotype of C. elegans by Çelen, İrem, Doh, Jung H, Sabanayagam, Chandran R

“…Liquid cultures have been commonly used in space, toxicology, and pharmacology studies of Caenorhabditis elegans. However, the knowledge about transcriptomic…”
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Bioinformatics Knowledge Map for Analysis of Beta-Catenin Function in Cancer by Çelen, İrem, Ross, Karen E, Arighi, Cecilia N, Wu, Cathy H

“…Given the wealth of bioinformatics resources and the growing complexity of biological information, it is valuable to integrate data from disparate sources to…”
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Transcriptomic Signature of the Simulated Microgravity Response in Caenorhabditis elegans and Comparison to Spaceflight Experiments by Çelen, İrem, Jayasinghe, Aroshan, Doh, Jung H, Sabanayagam, Chandran R

“…Given the growing interest in human exploration of space, it is crucial to identify the effects of space conditions on biological processes. Here, we analyze…”
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Protein Ontology: a controlled structured network of protein entities by Natale, Darren A, Arighi, Cecilia N, Blake, Judith A, Bult, Carol J, Christie, Karen R, Cowart, Julie, D'Eustachio, Peter, Diehl, Alexander D, Drabkin, Harold J, Helfer, Olivia, Huang, Hongzhan, Masci, Anna Maria, Ren, Jia, Roberts, Natalia V, Ross, Karen, Ruttenberg, Alan, Shamovsky, Veronica, Smith, Barry, Yerramalla, Meher Shruti, Zhang, Jian, AlJanahi, Aisha, Çelen, Irem, Gan, Cynthia, Lv, Mengxi, Schuster-Lezell, Emily, Wu, Cathy H

“…The Protein Ontology (PRO; http://proconsortium.org) formally defines protein entities and explicitly represents their major forms and interrelations. Protein…”
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RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information by Torii, Manabu, Li, Gang, Li, Zhiwen, Oughtred, Rose, Diella, Francesca, Celen, Irem, Arighi, Cecilia N, Huang, Hongzhan, Vijay-Shanker, K, Wu, Cathy H

“…Protein phosphorylation is central to the regulation of most aspects of cell function. Given its importance, it has been the subject of active research as well…”
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Multi-Scale Spatio-Temporal Dynamics of Histone Modifications by Celen, Irem, Doh, Jung, Sabanayagam, Chandran

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Wormpharm: A Microfluidic Platform for Pharmacogenetic Studies on C. Elegans by Moore, Andrew, Doh, Jung, Celen, Irem, Moore, Michael, Sabanayagam, Chandran

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Integrative Analysis of Space Environment Responsive Gene Networks by Celen, Irem

“…Environmental changes are important factors that can cause crucial health and survival consequences for all domains of life. As such, twin studies indicated…”
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Clinorotation to Simulate Microgravity: Defining a Model Gravitome in C. elegans by Sabanayagam, Chandran R., Celen, Irem, Doh, Jung H., Moore, Michael T.

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Inequality of the Clones: Life-Long Tracking of Single Animals Reveals Discordant Traits in C. elegans by Moore, Andrew, Smith, Donnel, Celen, Irem, Moore, Michael T., Sabanayagam, Chandran

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Multigenerational Study of Spaceflight-Responsive Gene Networks by Celen, Irem, Doh, Jung, Jayasinghe, Aroshan, Moore, Michael, Moore, Andrew, Sabanayagam, Chandran

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Worms in Space: Epigenetic Response of C. Elegans in Simulated Microgravity by Sabanayagam, Chandran R., Jayasinghe, Aroshan K., Doh, Jung H., Celen, Irem, Moore, Andrew, Moore, Michael T.

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Construction of integrated knowledge map for understanding protein function in disease: Cancer-driver mechanisms of beta catenin by Celen, Irem

“…Disease driver mechanisms of proteins are highly complex; therefore, there is a plethora of information available from extensive studies for these mechanisms…”
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ChIP and Chips: Introducing the WormPharm for correlative studies employing pharmacology and genome-wide analyses in C. elegans by Doh, Jung H, Moore, Andrew B, Çelen, İrem, Moore, Michael T, Sabanayagam, Chandram R

“…We present the WormPharm, an automated microfluidic platform that utilizes an axenic medium to culture . The WormPharm is capable of sustaining for extended…”
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